Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04679 | Sorghum | cytosol | 96.97 | 66.67 |
| KXG29686 | Sorghum | cytosol | 94.7 | 65.44 |
| Zm00001d015868_P001 | Maize | nucleus | 70.45 | 43.26 |
| OQU78879 | Sorghum | endoplasmic reticulum | 38.64 | 23.94 |
| EES15787 | Sorghum | endoplasmic reticulum | 38.64 | 23.83 |
| KXG25377 | Sorghum | extracellular | 37.12 | 23.22 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 32.58 | 20.38 |
| EER91885 | Sorghum | nucleus | 39.39 | 20.0 |
| OQU76729 | Sorghum | cytosol, plastid | 38.64 | 19.92 |
| TraesCS6A01G168400.1 | Wheat | cytosol | 31.82 | 19.53 |
| EES07500 | Sorghum | nucleus | 29.55 | 19.5 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 31.06 | 19.43 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 31.82 | 19.18 |
| EES12755 | Sorghum | nucleus | 36.36 | 19.12 |
| KXG30975 | Sorghum | nucleus | 36.36 | 19.05 |
| TraesCS2A01G496300.1 | Wheat | mitochondrion | 25.76 | 15.67 |
| KXG29636 | Sorghum | nucleus | 28.03 | 15.61 |
| EER90181 | Sorghum | cytosol | 28.79 | 15.38 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 25.0 | 15.07 |
| EES04603 | Sorghum | nucleus | 28.79 | 14.73 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 20.45 | 13.85 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 15.91 | 13.04 |
| TraesCS2A01G496500.1 | Wheat | nucleus | 15.15 | 12.66 |
| TraesCS2A01G496400.1 | Wheat | mitochondrion | 15.15 | 12.42 |
Protein Annotations
| EnsemblPlants:OQU84555 | EnsemblPlantsGene:SORBI_3004G076666 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF4 | PFAM:PF04640 |
| ProteinID:OQU84555 | ProteinID:OQU84555.1 | UniParc:UPI000B8BAB85 | UniProt:A0A1Z5RM67 | MapMan:15.5.43 | : |
Description
hypothetical protein
Coordinates
chr4:+:6293762..6307731
Molecular Weight (calculated)
14768.5 Da
IEP (calculated)
6.659
GRAVY (calculated)
-0.191
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKEMAWS DKERAPPAWL HTLLATTFFD ACPEHLESEG CANRRTATSC NFFCTHCAGH ALCSSCLDTH EGHELIQIRK LSGHNAVKVD DVQHLLSVSF
101: VQTYLYNGGY VVFLNRRPMY GLGNHGVSHC EE
101: VQTYLYNGGY VVFLNRRPMY GLGNHGVSHC EE
001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.