Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84555 | Sorghum | cytosol | 66.67 | 96.97 |
| KXG29686 | Sorghum | cytosol | 94.79 | 95.29 |
| Zm00001d015868_P001 | Maize | nucleus | 69.27 | 61.86 |
| EES15787 | Sorghum | endoplasmic reticulum | 35.94 | 32.24 |
| OQU78879 | Sorghum | endoplasmic reticulum | 34.9 | 31.46 |
| KXG25377 | Sorghum | extracellular | 31.77 | 28.91 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 31.25 | 28.44 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 30.21 | 27.49 |
| TraesCS6A01G168400.1 | Wheat | cytosol | 30.73 | 27.44 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 30.21 | 26.48 |
| EES12755 | Sorghum | nucleus | 33.85 | 25.9 |
| KXG30975 | Sorghum | nucleus | 33.85 | 25.79 |
| EER91885 | Sorghum | nucleus | 34.9 | 25.77 |
| OQU76729 | Sorghum | cytosol, plastid | 33.85 | 25.39 |
| EES07500 | Sorghum | nucleus | 26.04 | 25.0 |
| TraesCS2A01G496300.1 | Wheat | mitochondrion | 27.08 | 23.96 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 19.27 | 22.98 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 25.52 | 22.37 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 22.4 | 22.05 |
| TraesCS2A01G496400.1 | Wheat | mitochondrion | 18.23 | 21.74 |
| TraesCS2A01G496500.1 | Wheat | nucleus | 17.19 | 20.89 |
| KXG29636 | Sorghum | nucleus | 24.48 | 19.83 |
| EER90181 | Sorghum | cytosol | 23.96 | 18.62 |
| EES04603 | Sorghum | nucleus | 24.48 | 18.22 |
Protein Annotations
| EnsemblPlants:EES04679 | EnsemblPlantsGene:SORBI_3004G076600 | EntrezGene:8071616 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF4 |
| PFAM:PF04640 | ProteinID:EES04679 | ProteinID:EES04679.1 | RefSeq:XP_002451703.1 | UniParc:UPI0001A85744 | UniProt:C5XXE3 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:6275918..6278532
Molecular Weight (calculated)
21483.1 Da
IEP (calculated)
5.923
GRAVY (calculated)
-0.352
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSLKEMARS DKERAPPAWL HTLLATTFFD ACPEHLESEG CANRRTATSC NFFCTHCAGH ALCSSCLDNH EGHELIQIRK LSGHNAVKVD DIQHLLSVSF
101: VQTYLYNGGY AVFLNRRPMY GLGNHGVSHC EECERGLLDK AYRFCSFGCK AEGIEDRLDF NVSFAVNPNK YETESDDNEG SFSEAGYHMS IV
101: VQTYLYNGGY AVFLNRRPMY GLGNHGVSHC EECERGLLDK AYRFCSFGCK AEGIEDRLDF NVSFAVNPNK YETESDDNEG SFSEAGYHMS IV
001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.