Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002489_P001 | Maize | nucleus | 90.84 | 89.06 |
| Os04t0591100-01 | Rice | nucleus | 88.05 | 88.75 |
| Zm00001d026047_P002 | Maize | nucleus | 88.45 | 87.75 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 81.67 | 83.33 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 81.27 | 82.93 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 80.88 | 82.52 |
| KRH75604 | Soybean | nucleus | 63.74 | 76.19 |
| KXG30975 | Sorghum | nucleus | 75.7 | 75.4 |
| KRH74408 | Soybean | nucleus | 65.34 | 69.49 |
| PGSC0003DMT400045164 | Potato | nucleus | 62.55 | 69.16 |
| KRH39550 | Soybean | nucleus | 64.94 | 69.07 |
| Solyc08g076860.2.1 | Tomato | nucleus | 62.15 | 68.42 |
| Solyc06g061240.2.1 | Tomato | nucleus | 59.36 | 66.52 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 60.96 | 66.23 |
| AT1G32700.1 | Thale cress | cytosol | 56.18 | 66.2 |
| PGSC0003DMT400019836 | Potato | nucleus | 58.57 | 65.92 |
| Bra035494.1-P | Field mustard | nucleus | 56.97 | 65.3 |
| KRH27687 | Soybean | cytosol | 60.56 | 65.24 |
| KRH24008 | Soybean | cytosol | 57.77 | 65.02 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 57.37 | 64.57 |
| CDY01500 | Canola | nucleus | 54.58 | 64.02 |
| Bra012632.1-P | Field mustard | nucleus | 54.18 | 63.55 |
| PGSC0003DMT400046007 | Potato | cytosol | 56.57 | 63.39 |
| CDX90437 | Canola | nucleus | 53.78 | 63.08 |
| CDY08880 | Canola | nucleus | 56.18 | 62.95 |
| AT4G17900.1 | Thale cress | nucleus | 56.57 | 62.56 |
| CDX76551 | Canola | nucleus | 55.78 | 62.5 |
| Bra021029.1-P | Field mustard | nucleus | 55.78 | 62.5 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 64.94 | 62.21 |
| KRH77790 | Soybean | nucleus | 61.75 | 61.75 |
| Solyc08g005100.2.1 | Tomato | cytosol | 54.98 | 61.61 |
| CDX78810 | Canola | nucleus | 54.98 | 60.79 |
| CDY44504 | Canola | nucleus | 54.98 | 60.79 |
| Bra013266.1-P | Field mustard | nucleus | 53.78 | 59.47 |
| CDY03199 | Canola | nucleus | 52.19 | 58.22 |
| CDY35177 | Canola | nucleus | 52.59 | 57.64 |
| Bra017531.1-P | Field mustard | nucleus | 52.19 | 57.21 |
| CDY69910 | Canola | nucleus | 51.39 | 57.08 |
| CDY69918 | Canola | nucleus | 51.0 | 56.64 |
| Bra025003.1-P | Field mustard | nucleus | 51.0 | 56.64 |
| CDY66745 | Canola | nucleus | 47.01 | 52.91 |
| Bra022055.1-P | Field mustard | nucleus | 47.01 | 52.91 |
| EER91885 | Sorghum | nucleus | 54.18 | 52.31 |
| AT5G46710.1 | Thale cress | nucleus | 46.61 | 51.77 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 58.17 | 51.41 |
| CDY72135 | Canola | cytosol, nucleus | 43.82 | 51.16 |
| CDX87686 | Canola | nucleus | 47.01 | 51.08 |
| Bra023280.1-P | Field mustard | mitochondrion | 56.97 | 50.53 |
| Bra022058.1-P | Field mustard | nucleus | 45.42 | 49.78 |
| CDY44664 | Canola | plasma membrane | 58.17 | 49.66 |
| CDX87684 | Canola | nucleus | 45.82 | 48.94 |
| KXG25377 | Sorghum | extracellular | 37.85 | 45.02 |
| EES15787 | Sorghum | endoplasmic reticulum | 37.45 | 43.93 |
| OQU78879 | Sorghum | endoplasmic reticulum | 36.65 | 43.19 |
| OQU76729 | Sorghum | cytosol, plastid | 43.43 | 42.58 |
| OQU84555 | Sorghum | cytosol | 19.12 | 36.36 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 49.4 | 34.07 |
| EES04679 | Sorghum | cytosol | 25.9 | 33.85 |
| KXG29686 | Sorghum | cytosol | 25.5 | 33.51 |
| KXG29636 | Sorghum | nucleus | 30.28 | 32.07 |
| EES07500 | Sorghum | nucleus | 23.9 | 30.0 |
| EES04603 | Sorghum | nucleus | 30.28 | 29.46 |
| EER90181 | Sorghum | cytosol | 28.69 | 29.15 |
Protein Annotations
| EnsemblPlants:EES12755 | EnsemblPlantsGene:SORBI_3006G197800 | EntrezGene:8071082 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 |
| PFAM:PF04640 | ProteinID:EES12755 | ProteinID:EES12755.1 | RefSeq:XP_002448427.1 | SEG:seg | unigene:Sbi.1612 |
| UniParc:UPI0001A873CD | UniProt:C5YF04 | MapMan:15.5.43 | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:55027248..55029413
Molecular Weight (calculated)
27608.8 Da
IEP (calculated)
9.240
GRAVY (calculated)
-0.534
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDDESPLR VNTRGGAMGG GGCDGAENQR WPPWLKPLLG TSFFGQCKVH ADAHKSECNM YCLDCMNGAL CSQCLAYHRD HHAIQIRRSS YHDVIRVSEI
101: QKVLDITGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDTFR FCSLGCKIVG TSGDFRIRKK HVVVTKKKKQ AQHQHQHRGA AAASESEDDS
201: STSTSGGSDK SSVVQSFTPS TPPATANSFR TGKRRKGVPH RSPFGNLMVE F
101: QKVLDITGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDTFR FCSLGCKIVG TSGDFRIRKK HVVVTKKKKQ AQHQHQHRGA AAASESEDDS
201: STSTSGGSDK SSVVQSFTPS TPPATANSFR TGKRRKGVPH RSPFGNLMVE F
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.