Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400046007 | Potato | cytosol | 92.86 | 92.86 |
| KRH75604 | Soybean | nucleus | 71.88 | 76.67 |
| Solyc08g076860.2.1 | Tomato | nucleus | 75.45 | 74.12 |
| Solyc06g061240.2.1 | Tomato | nucleus | 74.11 | 74.11 |
| KRH74408 | Soybean | nucleus | 73.66 | 69.92 |
| KRH39550 | Soybean | nucleus | 73.21 | 69.49 |
| Bra035494.1-P | Field mustard | nucleus | 66.52 | 68.04 |
| AT1G32700.1 | Thale cress | cytosol | 64.29 | 67.61 |
| CDY01500 | Canola | nucleus | 62.95 | 65.89 |
| Bra012632.1-P | Field mustard | nucleus | 62.05 | 64.95 |
| CDX90437 | Canola | nucleus | 62.05 | 64.95 |
| CDY44504 | Canola | nucleus | 63.84 | 63.0 |
| CDX78810 | Canola | nucleus | 63.84 | 63.0 |
| AT4G17900.1 | Thale cress | nucleus | 63.84 | 63.0 |
| Bra013266.1-P | Field mustard | nucleus | 63.39 | 62.56 |
| Bra021029.1-P | Field mustard | nucleus | 62.05 | 62.05 |
| CDX76551 | Canola | nucleus | 62.05 | 62.05 |
| CDY08880 | Canola | nucleus | 61.16 | 61.16 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 71.43 | 61.07 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 64.29 | 58.54 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 64.29 | 58.54 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 64.29 | 58.54 |
| Os04t0591100-01 | Rice | nucleus | 64.29 | 57.83 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 63.84 | 57.66 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 63.84 | 57.43 |
| CDY66745 | Canola | nucleus | 56.25 | 56.5 |
| Bra022055.1-P | Field mustard | nucleus | 56.25 | 56.5 |
| CDY72135 | Canola | cytosol, nucleus | 54.02 | 56.28 |
| KXG30975 | Sorghum | nucleus | 62.95 | 55.95 |
| Os02t0692700-01 | Rice | nucleus | 63.84 | 55.64 |
| CDY03199 | Canola | nucleus | 55.8 | 55.56 |
| CDY35177 | Canola | nucleus | 56.25 | 55.02 |
| EES12755 | Sorghum | nucleus | 61.61 | 54.98 |
| Zm00001d017682_P001 | Maize | nucleus | 61.61 | 54.76 |
| Zm00001d002489_P001 | Maize | nucleus | 62.5 | 54.69 |
| Bra017531.1-P | Field mustard | nucleus | 55.8 | 54.59 |
| CDY69910 | Canola | nucleus | 54.91 | 54.42 |
| CDY69918 | Canola | nucleus | 54.91 | 54.42 |
| Bra025003.1-P | Field mustard | nucleus | 54.91 | 54.42 |
| Zm00001d026047_P002 | Maize | nucleus | 61.16 | 54.15 |
| Bra022058.1-P | Field mustard | nucleus | 54.46 | 53.28 |
| CDX87686 | Canola | nucleus | 54.91 | 53.25 |
| Zm00001d051511_P001 | Maize | nucleus | 59.38 | 52.99 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 66.52 | 52.46 |
| CDX87684 | Canola | nucleus | 54.91 | 52.34 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 62.95 | 51.27 |
| Bra023280.1-P | Field mustard | mitochondrion | 64.73 | 51.24 |
| CDY44664 | Canola | plasma membrane | 66.07 | 50.34 |
| Solyc10g085800.1.1 | Tomato | extracellular | 45.09 | 49.27 |
| AT5G46710.1 | Thale cress | nucleus | 48.66 | 48.23 |
| Solyc07g049130.1.1 | Tomato | nucleus | 26.79 | 37.74 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 26.79 | 37.74 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 54.02 | 37.69 |
| Solyc02g033100.1.1 | Tomato | nucleus | 27.23 | 33.7 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 37.5 | 33.6 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 54.02 | 33.24 |
| Solyc02g036230.1.1 | Tomato | nucleus | 26.79 | 33.15 |
| Solyc12g010470.1.1 | Tomato | cytosol | 35.27 | 32.11 |
| Solyc02g036140.1.1 | Tomato | nucleus | 24.11 | 31.95 |
| Solyc02g036170.1.1 | Tomato | nucleus | 23.66 | 31.36 |
| Solyc02g068510.1.1 | Tomato | cytosol | 33.48 | 31.12 |
| Solyc07g007320.1.1 | Tomato | cytosol | 35.27 | 30.98 |
| Solyc02g033110.1.1 | Tomato | nucleus | 21.88 | 30.62 |
| Solyc04g008090.2.1 | Tomato | cytosol | 29.02 | 30.52 |
| Solyc02g036130.1.1 | Tomato | cytosol | 18.3 | 29.93 |
| Solyc02g036200.1.1 | Tomato | nucleus | 23.66 | 29.61 |
| Solyc02g033120.1.1 | Tomato | nucleus | 20.98 | 29.38 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 18.75 | 25.93 |
Protein Annotations
| EnsemblPlants:Solyc08g005100.2.1 | EnsemblPlantsGene:Solyc08g005100.2 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 | PFAM:PF04640 |
| UniParc:UPI000276B68C | UniProt:K4CI02 | MapMan:15.5.43 | : | : | : |
Description
No Description!
Coordinates
chr8:+:70109..72816
Molecular Weight (calculated)
25626.9 Da
IEP (calculated)
9.576
GRAVY (calculated)
-0.498
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVGGADEEE NNWPPWLKSL LKERFFFQCK LHIDSHKNEC NMYCLDCING PLCSLCLSHH KDHIVIQIRR SSYHDVIRVN EIQKYLDISL VQTYIINSAK
101: IVFLNERPQP RQGKGVTNTC QVCERTLLDS FKFCSLGCKV IGTSKNFIKK PRDLSAKRQL KAIASDSDDP YSPNNHSRYR STIINKVQSF IPSTPPPSSV
201: NYRTAKRRKG IPHRSPMGGL VIEY
101: IVFLNERPQP RQGKGVTNTC QVCERTLLDS FKFCSLGCKV IGTSKNFIKK PRDLSAKRQL KAIASDSDDP YSPNNHSRYR STIINKVQSF IPSTPPPSSV
201: NYRTAKRRKG IPHRSPMGGL VIEY
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.