Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g036170.1.1 | Tomato | nucleus | 92.18 | 97.63 |
| Solyc02g036130.1.1 | Tomato | cytosol | 68.72 | 89.78 |
| Solyc02g036140.1.1 | Tomato | nucleus | 84.36 | 89.35 |
| Solyc02g033110.1.1 | Tomato | nucleus | 78.21 | 87.5 |
| Solyc02g033120.1.1 | Tomato | nucleus | 77.09 | 86.25 |
| Solyc02g036230.1.1 | Tomato | nucleus | 81.01 | 80.11 |
| PGSC0003DMT400089328 | Potato | vacuole | 67.6 | 76.1 |
| Solyc02g033100.1.1 | Tomato | nucleus | 72.07 | 71.27 |
| Solyc07g049130.1.1 | Tomato | nucleus | 59.22 | 66.67 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 58.1 | 65.41 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 57.54 | 63.58 |
| KRH72960 | Soybean | nucleus | 27.37 | 48.51 |
| Solyc04g008090.2.1 | Tomato | cytosol | 31.84 | 26.76 |
| Solyc10g085800.1.1 | Tomato | extracellular | 27.37 | 23.9 |
| Solyc08g005100.2.1 | Tomato | cytosol | 29.61 | 23.66 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.37 | 22.9 |
| Solyc08g076860.2.1 | Tomato | nucleus | 27.93 | 21.93 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 24.02 | 21.72 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 24.58 | 21.67 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 24.58 | 21.67 |
| Solyc06g061240.2.1 | Tomato | nucleus | 26.82 | 21.43 |
| EES07500 | Sorghum | nucleus | 23.46 | 21.0 |
| Solyc02g068510.1.1 | Tomato | cytosol | 27.37 | 20.33 |
| Zm00001d051376_P001 | Maize | cytosol | 22.35 | 20.2 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 26.82 | 19.2 |
| Solyc07g007320.1.1 | Tomato | cytosol | 26.26 | 18.43 |
| Os02t0661400-00 | Rice | cytosol | 22.91 | 18.14 |
| Solyc12g010470.1.1 | Tomato | cytosol | 24.58 | 17.89 |
Protein Annotations
| EnsemblPlants:Solyc02g036200.1.1 | EnsemblPlantsGene:Solyc02g036200.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF9 | PFAM:PF04640 | PFscan:PS50119 | SUPFAM:SSF57845 | UniParc:UPI0002767727 | UniProt:K4B5R3 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:30248895..30252229
Molecular Weight (calculated)
20491.9 Da
IEP (calculated)
8.620
GRAVY (calculated)
-0.335
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSASSPFE TNEQPMSPLS SFVRGELKPG RSMPTWLGPL LKKTFFGECL VHDGLQKNER SKYCITCDSD LCRYCISTNK HNDHDQLKIY RHVYKDVVPL
101: EQMMKYIDCK LIQTYKCNKK WIIALNPLPH SGSGSLIAGD PTCLTCKRRL HDLERFQFCS IACQVHFSPS VSNLVVVWR
101: EQMMKYIDCK LIQTYKCNKK WIIALNPLPH SGSGSLIAGD PTCLTCKRRL HDLERFQFCS IACQVHFSPS VSNLVVVWR
001: MNLSEKRRSE EVWIETLLNS EFFGICMNHK YLRKNEKNVF CIDCNVEICR HCCNTVTDSH FLHRRLQICK YVYQDVIRLL EIQNYFDCSE IQTYKINGEK
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A8MQN6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.