Factsheet for Solyc02g036140.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g036170.1.1	Tomato	nucleus	91.12	91.12
Solyc02g036130.1.1	Tomato	cytosol	73.37	90.51
Solyc02g033110.1.1	Tomato	nucleus	82.25	86.88
Solyc02g033120.1.1	Tomato	nucleus	81.07	85.62
Solyc02g036200.1.1	Tomato	nucleus	89.35	84.36
Solyc02g036230.1.1	Tomato	nucleus	82.25	76.8
PGSC0003DMT400089328	Potato	vacuole	69.23	73.58
Solyc02g033100.1.1	Tomato	nucleus	76.33	71.27
Solyc07g049130.1.1	Tomato	nucleus	62.72	66.67
Solyc07g049120.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.54	65.41
Solyc02g036120.1.1	Tomato	peroxisome	60.35	62.96
KRH72960	Soybean	nucleus	26.63	44.55
Solyc04g008090.2.1	Tomato	cytosol	31.36	24.88
Solyc08g005100.2.1	Tomato	cytosol	31.95	24.11
Solyc10g085800.1.1	Tomato	extracellular	28.4	23.41
GSMUA_AchrUn_...	Banana	nucleus	28.4	22.43
Solyc08g076860.2.1	Tomato	nucleus	30.18	22.37
Solyc06g061240.2.1	Tomato	nucleus	28.4	21.43
TraesCS6B01G276500.1	Wheat	cytosol	24.85	21.21
TraesCS6A01G248200.1	Wheat	cytosol	25.44	21.18
TraesCS6D01G230300.1	Wheat	cytosol	25.44	21.18
EES07500	Sorghum	nucleus	24.85	21.0
Zm00001d051376_P001	Maize	cytosol	23.08	19.7
Solyc02g068510.1.1	Tomato	cytosol	27.22	19.09
Os02t0661400-00	Rice	cytosol	24.26	18.14
Solyc01g091000.2.1	Tomato	cytosol, nucleus, plasma membrane	26.63	18.0
Solyc07g007320.1.1	Tomato	cytosol	26.04	17.25
Solyc12g010470.1.1	Tomato	cytosol	24.26	16.67

Protein Annotations

EnsemblPlants:Solyc02g036140.1.1	EnsemblPlantsGene:Solyc02g036140.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008270	InterPro:DUF597	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31065
PANTHER:PTHR31065:SF9	PFAM:PF04640	PFscan:PS50119	SUPFAM:SSF57845	UniParc:UPI0002767722	UniProt:K4B5Q8
MapMan:15.5.43	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:30106604..30110985

Molecular Weight (calculated)

19294.5 Da

IEP (calculated)

8.425

GRAVY (calculated)

-0.359

Length

169 amino acids

Sequence
(BLAST)

001: MGSTDSSPFE TNEQGELKPS RSMPTWLGPL LKKTFFGECL VHDGLQKNQR SKYCITCDSD LCRYCIATNK HNDHDQLKIY RHVYKDVVPV EQMKKYIDCK
101: LIQTYKCNKK WIIALNPLPH SGSGSLIVGD PTCLTCKRRL HDPERFQFCS IACQVLIPPS ISNLVVICQ

Best Arabidopsis Sequence Match ( AT2G01818.1 )
(BLAST)

001: MNLSEKRRSE EVWIETLLNS EFFGICMNHK YLRKNEKNVF CIDCNVEICR HCCNTVTDSH FLHRRLQICK YVYQDVIRLL EIQNYFDCSE IQTYKINGEK
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A8MQN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.