Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g049130.1.1 | Tomato | nucleus | 94.97 | 94.97 |
| PGSC0003DMT400097455 | Potato | cytosol | 61.01 | 89.81 |
| Solyc02g033100.1.1 | Tomato | nucleus | 79.25 | 69.61 |
| Solyc02g036230.1.1 | Tomato | nucleus | 74.21 | 65.19 |
| Solyc02g033120.1.1 | Tomato | nucleus | 62.89 | 62.5 |
| Solyc02g036170.1.1 | Tomato | nucleus | 66.04 | 62.13 |
| Solyc02g033110.1.1 | Tomato | nucleus | 62.26 | 61.88 |
| Solyc02g036140.1.1 | Tomato | nucleus | 65.41 | 61.54 |
| Solyc02g036130.1.1 | Tomato | cytosol | 50.31 | 58.39 |
| Solyc02g036200.1.1 | Tomato | nucleus | 65.41 | 58.1 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 54.09 | 53.09 |
| KRH72960 | Soybean | nucleus | 28.3 | 44.55 |
| Solyc04g008090.2.1 | Tomato | cytosol | 41.51 | 30.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 40.88 | 30.37 |
| Solyc10g085800.1.1 | Tomato | extracellular | 36.48 | 28.29 |
| Solyc06g061240.2.1 | Tomato | nucleus | 37.74 | 26.79 |
| Solyc08g005100.2.1 | Tomato | cytosol | 37.74 | 26.79 |
| Solyc08g076860.2.1 | Tomato | nucleus | 38.36 | 26.75 |
| Solyc02g068510.1.1 | Tomato | cytosol | 38.99 | 25.73 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 30.82 | 24.75 |
| EES07500 | Sorghum | nucleus | 30.82 | 24.5 |
| Zm00001d051376_P001 | Maize | cytosol | 30.19 | 24.24 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 30.82 | 24.14 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 30.82 | 24.14 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 36.48 | 23.2 |
| Solyc12g010470.1.1 | Tomato | cytosol | 35.85 | 23.17 |
| Solyc07g007320.1.1 | Tomato | cytosol | 37.11 | 23.14 |
| Os02t0661400-00 | Rice | cytosol | 29.56 | 20.8 |
Protein Annotations
| EnsemblPlants:Solyc07g049120.1.1 | EnsemblPlantsGene:Solyc07g049120.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 | InterPro:Znf_B-box | PANTHER:PTHR31065 |
| PANTHER:PTHR31065:SF9 | PFAM:PF00643 | PFAM:PF04640 | PFscan:PS50119 | SUPFAM:SSF57845 | UniParc:UPI000276B04A |
| UniProt:K4CF17 | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:59344199..59346197
Molecular Weight (calculated)
18580.6 Da
IEP (calculated)
8.669
GRAVY (calculated)
-0.610
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAWLGPFLK KIFFGTCLVH DELQKNELNK YCITCDSDLC RNCVATDEHN EHDLLQIYRH VYKDVVPLDE MEKYIDCTKI QPYKCNKKWV VALNPLPHNG
101: SGSLIVGDPT CYTCKRRLND PEQFRFCCIA CQVEAKREKP VETKRKRKRK GIPHRAPLK
101: SGSLIVGDPT CYTCKRRLND PEQFRFCCIA CQVEAKREKP VETKRKRKRK GIPHRAPLK
001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
Arabidopsis Description
At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.