Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400020401 | Potato | cytosol | 99.59 | 99.59 |
| Solyc07g007320.1.1 | Tomato | cytosol | 80.08 | 77.25 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 76.02 | 76.33 |
| KRH12861 | Soybean | nucleus | 72.36 | 74.48 |
| KRH37851 | Soybean | nucleus | 71.95 | 74.06 |
| KRH03576 | Soybean | nucleus | 74.39 | 73.79 |
| KRH20236 | Soybean | nucleus | 73.98 | 73.68 |
| Zm00001d015560_P001 | Maize | nucleus | 66.26 | 68.78 |
| KXG29636 | Sorghum | nucleus | 65.45 | 67.93 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 65.04 | 67.51 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 64.63 | 67.09 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 64.63 | 67.09 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 64.63 | 67.09 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 63.82 | 66.24 |
| AT2G12646.1 | Thale cress | nucleus | 66.26 | 63.67 |
| CDY37203 | Canola | cytosol | 65.04 | 62.75 |
| Bra037203.1-P | Field mustard | cytosol | 65.04 | 62.75 |
| CDX81439 | Canola | cytosol | 65.04 | 62.5 |
| Bra013149.1-P | Field mustard | cytosol | 67.07 | 59.57 |
| CDX93111 | Canola | cytosol | 67.07 | 59.57 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 59.76 | 59.27 |
| CDX89603 | Canola | cytosol | 66.67 | 59.21 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 65.04 | 56.34 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 56.5 | 55.6 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 60.57 | 52.28 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 45.53 | 44.8 |
| Solyc02g068510.1.1 | Tomato | cytosol | 41.06 | 41.91 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 23.17 | 35.85 |
| Solyc08g005100.2.1 | Tomato | cytosol | 32.11 | 35.27 |
| Solyc07g049130.1.1 | Tomato | nucleus | 22.76 | 35.22 |
| Solyc10g085800.1.1 | Tomato | extracellular | 29.27 | 35.12 |
| Solyc06g061240.2.1 | Tomato | nucleus | 30.89 | 33.93 |
| Solyc08g076860.2.1 | Tomato | nucleus | 30.49 | 32.89 |
| Solyc02g033100.1.1 | Tomato | nucleus | 22.76 | 30.94 |
| Solyc04g008090.2.1 | Tomato | cytosol | 25.61 | 29.58 |
| Solyc02g036230.1.1 | Tomato | nucleus | 20.73 | 28.18 |
| Solyc02g036170.1.1 | Tomato | nucleus | 17.89 | 26.04 |
| Solyc02g033120.1.1 | Tomato | nucleus | 16.67 | 25.62 |
| Solyc02g033110.1.1 | Tomato | nucleus | 16.67 | 25.62 |
| Solyc02g036130.1.1 | Tomato | cytosol | 13.82 | 24.82 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 16.26 | 24.69 |
| Solyc02g036200.1.1 | Tomato | nucleus | 17.89 | 24.58 |
| Solyc02g036140.1.1 | Tomato | nucleus | 16.67 | 24.26 |
Protein Annotations
| EnsemblPlants:Solyc12g010470.1.1 | EnsemblPlantsGene:Solyc12g010470.1 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF11 | PFAM:PF04640 |
| SEG:seg | UniParc:UPI0002769E5F | UniProt:K4DCD4 | MapMan:15.5.43 | : | : |
Description
No Description!
Coordinates
chr12:+:3487139..3488997
Molecular Weight (calculated)
28029.5 Da
IEP (calculated)
8.142
GRAVY (calculated)
-0.427
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIQKPSWLK ALYVEKFFVP CSIHESAKKN EKNVCCLDCN ISICPHCVTS HRVHRLLQIR RYVYHEVVRL EDIENLIDCS NIQAYTINNA KVVFIKKRPQ
101: NRQFKGGNYC TSCDRSLQEP FIHCSLGCKV DFVLKHHKDL SPFLRRCTIL QLSSDFFIPQ DMGDDDMAID TAHSTIVDND EPWSSSSSTG SGSENMSFPC
201: TEFVRKKRSG MHVCGRSANN CNNITEEDMA TSISRRKGIP QRSPLC
101: NRQFKGGNYC TSCDRSLQEP FIHCSLGCKV DFVLKHHKDL SPFLRRCTIL QLSSDFFIPQ DMGDDDMAID TAHSTIVDND EPWSSSSSTG SGSENMSFPC
201: TEFVRKKRSG MHVCGRSANN CNNITEEDMA TSISRRKGIP QRSPLC
001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.