Factsheet for Solyc02g036230.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g036170.1.1	Tomato	nucleus	81.22	86.98
PGSC0003DMT400089328	Potato	vacuole	76.24	86.79
Solyc02g033110.1.1	Tomato	nucleus	75.14	85.0
Solyc02g033120.1.1	Tomato	nucleus	74.03	83.75
Solyc02g036130.1.1	Tomato	cytosol	62.98	83.21
Solyc02g036140.1.1	Tomato	nucleus	76.8	82.25
Solyc02g033100.1.1	Tomato	nucleus	81.77	81.77
Solyc02g036200.1.1	Tomato	nucleus	80.11	81.01
Solyc07g049130.1.1	Tomato	nucleus	67.4	76.73
Solyc07g049120.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	65.19	74.21
Solyc02g036120.1.1	Tomato	peroxisome	55.25	61.73
KRH72960	Soybean	nucleus	28.18	50.49
Solyc04g008090.2.1	Tomato	cytosol	35.91	30.52
Solyc10g085800.1.1	Tomato	extracellular	32.04	28.29
Solyc08g005100.2.1	Tomato	cytosol	33.15	26.79
Solyc08g076860.2.1	Tomato	nucleus	32.04	25.44
GSMUA_AchrUn_...	Banana	nucleus	29.83	25.23
Solyc06g061240.2.1	Tomato	nucleus	30.94	25.0
Solyc02g068510.1.1	Tomato	cytosol	30.39	22.82
TraesCS6B01G276500.1	Wheat	cytosol	24.86	22.73
TraesCS6A01G248200.1	Wheat	cytosol	24.31	21.67
TraesCS6D01G230300.1	Wheat	cytosol	24.31	21.67
Solyc01g091000.2.1	Tomato	cytosol, nucleus, plasma membrane	29.83	21.6
Solyc07g007320.1.1	Tomato	cytosol	30.39	21.57
EES07500	Sorghum	nucleus	23.2	21.0
Solyc12g010470.1.1	Tomato	cytosol	28.18	20.73
Zm00001d051376_P001	Maize	cytosol	22.65	20.71
Os02t0661400-00	Rice	cytosol	23.2	18.58

Protein Annotations

EnsemblPlants:Solyc02g036230.1.1	EnsemblPlantsGene:Solyc02g036230.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008270	InterPro:DUF597	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31065
PANTHER:PTHR31065:SF9	PFAM:PF04640	PFscan:PS50119	SUPFAM:SSF57845	UniParc:UPI000276772A	UniProt:K4B5R6
MapMan:15.5.43	:	:	:	:	:

Description

No Description!

Coordinates

chr2:-:30375814..30380579

Molecular Weight (calculated)

20865.5 Da

IEP (calculated)

9.846

GRAVY (calculated)

-0.709

Length

181 amino acids

Sequence
(BLAST)

001: MSSSASSPFE TNEQRELKPG RSMPTWLGPL LKKTFFGECL VHDGLQKNER SKYCITCDSD LCKYCISTKK HNDHDQLKIY RHVYKDVVSL EQMKKYIDSK
101: LIQTYKCNKK CIIALNPLPH SGSGSLIAGD PTCLTCKRRL HDPERFQFCR IACPVEEKWG KIAETKRKRK RKGIPCRAPL K

Best Arabidopsis Sequence Match ( AT2G01818.1 )
(BLAST)

001: MNLSEKRRSE EVWIETLLNS EFFGICMNHK YLRKNEKNVF CIDCNVEICR HCCNTVTDSH FLHRRLQICK YVYQDVIRLL EIQNYFDCSE IQTYKINGEK
101: AIHLNSRPQA KDARPSTKAK NGASCVTCKR YIQDHPNLFC SISCKISTPS KKHKFCFSPK LEQSVLEKEH STQEGSLEEK KSCTSSLTDV SEDSEVLLSD
201: FSFRPLLRIL KRKGISRRSP FY

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:A8MQN6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.