Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G276500.1 | Wheat | cytosol | 71.68 | 81.82 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 73.01 | 81.28 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 71.68 | 79.8 |
| EES07500 | Sorghum | nucleus | 69.91 | 79.0 |
| Zm00001d051376_P001 | Maize | cytosol | 66.37 | 75.76 |
| PGSC0003DMT400090715 | Potato | cytosol | 14.6 | 30.56 |
| PGSC0003DMT400097455 | Potato | cytosol | 14.6 | 30.56 |
| Os01t0517800-01 | Rice | extracellular | 23.01 | 30.41 |
| Solyc07g049130.1.1 | Tomato | nucleus | 20.8 | 29.56 |
| Solyc07g049120.1.1 | Tomato | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 20.8 | 29.56 |
| KRH72960 | Soybean | nucleus | 12.83 | 28.71 |
| Os08t0560300-01 | Rice | cytosol | 25.22 | 28.5 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 29.2 | 27.85 |
| Os02t0172800-01 | Rice | cytosol | 29.65 | 27.8 |
| Os06t0624900-01 | Rice | cytosol | 30.53 | 27.27 |
| PGSC0003DMT400089328 | Potato | vacuole | 19.03 | 27.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 25.22 | 26.64 |
| CDY36264 | Canola | nucleus | 22.57 | 26.56 |
| Os06t0666100-01 | Rice | nucleus | 30.53 | 26.44 |
| CDY17645 | Canola | nucleus | 26.99 | 26.18 |
| PGSC0003DMT400075780 | Potato | nucleus | 23.45 | 25.98 |
| Os11t0428700-00 | Rice | cytosol | 15.04 | 25.95 |
| Os10t0574700-01 | Rice | nucleus | 28.76 | 25.59 |
| CDY09414 | Canola | cytosol | 24.78 | 25.45 |
| Solyc02g033100.1.1 | Tomato | nucleus | 20.35 | 25.41 |
| Solyc04g008090.2.1 | Tomato | cytosol | 23.89 | 25.35 |
| Os04t0591100-01 | Rice | nucleus | 27.88 | 25.3 |
| Solyc02g033120.1.1 | Tomato | nucleus | 17.7 | 25.0 |
| AT2G01818.1 | Thale cress | nucleus | 24.34 | 24.77 |
| Os02t0692700-01 | Rice | nucleus | 27.88 | 24.51 |
| KRH49692 | Soybean | nucleus | 24.34 | 24.44 |
| Os01t0518000-01 | Rice | cytosol | 23.45 | 24.42 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 26.55 | 24.39 |
| Solyc02g033110.1.1 | Tomato | nucleus | 17.26 | 24.38 |
| Solyc02g036140.1.1 | Tomato | nucleus | 18.14 | 24.26 |
| Solyc02g036170.1.1 | Tomato | nucleus | 18.14 | 24.26 |
| Solyc02g036230.1.1 | Tomato | nucleus | 18.58 | 23.2 |
| Solyc02g036200.1.1 | Tomato | nucleus | 18.14 | 22.91 |
| Solyc02g036130.1.1 | Tomato | cytosol | 13.72 | 22.63 |
| KRH60448 | Soybean | nucleus | 22.57 | 21.43 |
| KRH41746 | Soybean | nucleus | 22.57 | 21.43 |
| Solyc02g036120.1.1 | Tomato | peroxisome | 14.6 | 20.37 |
Protein Annotations
| EnsemblPlants:Os02t0661400-00 | EnsemblPlantsGene:Os02g0661400 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF17 | PFAM:PF04640 |
| ProteinID:BAD25625.1 | ProteinID:BAS80143.1 | SEG:seg | UniParc:UPI00003B44EE | UniProt:Q6H6M4 | MapMan:15.5.43 |
Description
Protein of unknown function DUF597 domain containing protein. (Os02t0661400-00)
Coordinates
chr2:-:26781596..26782633
Molecular Weight (calculated)
24497.7 Da
IEP (calculated)
8.552
GRAVY (calculated)
-0.544
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MQSPAVRGAP QWLRGLLSEE FFDSCGAHPG ERKNDKNHFC VDCAAALCRH CLPHDASHGV LQIWKYASCF VVRVDDLKLF DCNGIQTYCT DHESYSYMVS
101: GVQSHTLSDH EVVFLNERTA RKRSASVENP CAACARPLPS GHDYCSLFCK VKHLGESDQG LRRALRVNRR SAAAAGGGGG GEDPAVAEAS QSGKRRASSS
201: ESGRSCGGTL RKRSRKQPAP ARSPSC
101: GVQSHTLSDH EVVFLNERTA RKRSASVENP CAACARPLPS GHDYCSLFCK VKHLGESDQG LRRALRVNRR SAAAAGGGGG GEDPAVAEAS QSGKRRASSS
201: ESGRSCGGTL RKRSRKQPAP ARSPSC
001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.