Factsheet for Solyc07g049130.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g049120.1.1	Tomato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.97	94.97
PGSC0003DMT400097455	Potato	cytosol	60.38	88.89
Solyc02g033100.1.1	Tomato	nucleus	81.13	71.27
Solyc02g036230.1.1	Tomato	nucleus	76.73	67.4
Solyc02g036170.1.1	Tomato	nucleus	67.3	63.31
Solyc02g036140.1.1	Tomato	nucleus	66.67	62.72
Solyc02g033120.1.1	Tomato	nucleus	62.89	62.5
Solyc02g033110.1.1	Tomato	nucleus	62.26	61.88
Solyc02g036130.1.1	Tomato	cytosol	51.57	59.85
Solyc02g036200.1.1	Tomato	nucleus	66.67	59.22
Solyc02g036120.1.1	Tomato	peroxisome	55.35	54.32
KRH72960	Soybean	nucleus	28.3	44.55
Solyc04g008090.2.1	Tomato	cytosol	41.51	30.99
GSMUA_AchrUn_...	Banana	nucleus	40.25	29.91
Solyc10g085800.1.1	Tomato	extracellular	37.11	28.78
Solyc06g061240.2.1	Tomato	nucleus	37.74	26.79
Solyc08g005100.2.1	Tomato	cytosol	37.74	26.79
Solyc08g076860.2.1	Tomato	nucleus	38.36	26.75
Solyc02g068510.1.1	Tomato	cytosol	38.99	25.73
TraesCS6B01G276500.1	Wheat	cytosol	30.82	24.75
EES07500	Sorghum	nucleus	30.82	24.5
Zm00001d051376_P001	Maize	cytosol	30.19	24.24
TraesCS6A01G248200.1	Wheat	cytosol	30.82	24.14
TraesCS6D01G230300.1	Wheat	cytosol	30.82	24.14
Solyc01g091000.2.1	Tomato	cytosol, nucleus, plasma membrane	36.48	23.2
Solyc12g010470.1.1	Tomato	cytosol	35.22	22.76
Solyc07g007320.1.1	Tomato	cytosol	36.48	22.75
Os02t0661400-00	Rice	cytosol	29.56	20.8

Protein Annotations

EnsemblPlants:Solyc07g049130.1.1	EnsemblPlantsGene:Solyc07g049130.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008270	InterPro:DUF597	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31065
PANTHER:PTHR31065:SF9	PFAM:PF00643	PFAM:PF04640	PFscan:PS50119	SUPFAM:SSF57845	UniParc:UPI000276B04B
UniProt:K4CF18	MapMan:15.5.43	:	:	:	:

Description

No Description!

Coordinates

chr7:-:59353184..59355212

Molecular Weight (calculated)

18581.7 Da

IEP (calculated)

9.210

GRAVY (calculated)

-0.633

Length

159 amino acids

Sequence
(BLAST)

001: MPAWLRPFLK KTFFGTCLVH DELQKNELNK YCITCDSDLC KNCIATDKHN GHDLLQIYRH VYKDVVPLDE MEKYIDCTRI QPYKCNKKWV VALNPLPHSG
101: SGSLIVGDPT CYTCKRRLND PEQFRFCCIA CQVEAKREKP VETKRKRKRK GIPHRAPLK

Best Arabidopsis Sequence Match ( AT3G60670.1 )
(BLAST)

001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY

Arabidopsis Description

At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.