Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P30690_001 | Banana | nucleus | 63.16 | 72.0 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 59.65 | 71.73 |
| Zm00001d015560_P001 | Maize | nucleus | 59.65 | 71.73 |
| KXG29636 | Sorghum | nucleus | 59.3 | 71.31 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 58.6 | 70.46 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 58.6 | 70.46 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 58.6 | 70.46 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 57.89 | 69.62 |
| VIT_11s0118g00600.t01 | Wine grape | nucleus | 59.65 | 69.39 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 57.19 | 65.73 |
| KRH12861 | Soybean | nucleus | 55.09 | 65.69 |
| KRH20236 | Soybean | nucleus | 56.49 | 65.18 |
| KRH03576 | Soybean | nucleus | 56.49 | 64.92 |
| KRH37851 | Soybean | nucleus | 54.39 | 64.85 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 61.75 | 61.97 |
| Solyc07g007320.1.1 | Tomato | cytosol | 54.39 | 60.78 |
| Solyc12g010470.1.1 | Tomato | cytosol | 52.28 | 60.57 |
| PGSC0003DMT400020401 | Potato | cytosol | 51.93 | 60.16 |
| AT2G12646.1 | Thale cress | nucleus | 51.58 | 57.42 |
| CDY37203 | Canola | cytosol | 50.88 | 56.86 |
| Bra037203.1-P | Field mustard | cytosol | 50.88 | 56.86 |
| CDX81439 | Canola | cytosol | 50.18 | 55.86 |
| Bra013149.1-P | Field mustard | cytosol | 51.23 | 52.71 |
| CDX93111 | Canola | cytosol | 51.23 | 52.71 |
| CDX89603 | Canola | cytosol | 50.88 | 52.35 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 39.3 | 49.56 |
| GSMUA_AchrUn_... | Banana | nucleus | 37.89 | 48.43 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 35.44 | 47.64 |
| GSMUA_Achr11P... | Banana | cytosol | 37.89 | 46.35 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 36.49 | 45.61 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 37.54 | 44.03 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 26.32 | 39.27 |
| GSMUA_AchrUn_... | Banana | cytosol | 27.02 | 38.12 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 25.96 | 36.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.02 | 35.98 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 22.11 | 34.24 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 27.72 | 32.92 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 27.37 | 32.23 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.21 | 31.8 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 25.61 | 31.74 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 27.72 | 31.73 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 25.26 | 31.72 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 23.86 | 31.63 |
| GSMUA_Achr11P... | Banana | nucleus | 26.67 | 31.54 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 26.32 | 31.51 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 26.67 | 30.04 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 26.67 | 29.69 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P35220_001 | EnsemblPlants:GSMUA_Achr6T35220_001 | EnsemblPlantsGene:GSMUA_Achr6G35220_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF11 |
| PFAM:PF04640 | UniParc:UPI000296EA4E | UniProt:M0TCW5 | MapMan:15.5.43 | : | : |
Description
zinc-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G35220_001]
Coordinates
chr6:-:33521660..33523082
Molecular Weight (calculated)
32460.6 Da
IEP (calculated)
8.538
GRAVY (calculated)
-0.629
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVESNRPPR AAAPLGLVYR AWLIGQEEFG HCRRTGQGRH GNSLHGAHKP AWLEALDKLK FFVGCSVHES ARKNEKNICC LDCCTAICPH CLRSHRLHRL
101: VQVRRYVYHD VVRLQDLDKL IDCSSVQSYT INSSKVVFLK KRPQSRQFKG AGNVCTSCDR TLQEPYIHCS LECKVDYIAR HKKDFSHYIR RCQSLQLSPD
201: SIVPPDTEVG DDEDTNETTH STVVEGDDPM RSSDSEDFNV PYLNFIRKKR SGINLCSRSA NKVDTEDMAT NMSRRKGIPH RSPLC
101: VQVRRYVYHD VVRLQDLDKL IDCSSVQSYT INSSKVVFLK KRPQSRQFKG AGNVCTSCDR TLQEPYIHCS LECKVDYIAR HKKDFSHYIR RCQSLQLSPD
201: SIVPPDTEVG DDEDTNETTH STVVEGDDPM RSSDSEDFNV PYLNFIRKKR SGINLCSRSA NKVDTEDMAT NMSRRKGIPH RSPLC
001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.