Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P18120_001 | Banana | nucleus | 77.31 | 76.67 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 79.41 | 75.9 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 76.05 | 74.79 |
| GSMUA_Achr11P... | Banana | nucleus | 72.27 | 71.37 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 75.21 | 69.92 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 67.23 | 69.57 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 68.07 | 64.03 |
| KRH13451 | Soybean | cytosol | 23.53 | 57.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.06 | 55.45 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 46.64 | 54.95 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 41.18 | 53.26 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 47.9 | 50.22 |
| GSMUA_AchrUn_... | Banana | cytosol | 44.12 | 48.39 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 42.44 | 46.98 |
| KRH45433 | Soybean | plastid | 44.96 | 45.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.03 | 37.85 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 31.93 | 33.63 |
| GSMUA_Achr11P... | Banana | cytosol | 31.93 | 32.62 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.83 | 31.84 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 28.15 | 31.6 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 29.41 | 30.7 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 31.09 | 29.84 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 30.25 | 29.63 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 30.25 | 28.8 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 21.85 | 27.23 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 31.51 | 26.32 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 30.67 | 25.7 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P03420_001 | EnsemblPlants:GSMUA_Achr5T03420_001 | EnsemblPlantsGene:GSMUA_Achr5G03420_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 |
| PFAM:PF04640 | SEG:seg | UniParc:UPI00029681DE | UniProt:M0SVC1 | MapMan:15.5.43 | : |
Description
zinc-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G03420_001]
Coordinates
chr5:-:2360436..2361967
Molecular Weight (calculated)
26833.9 Da
IEP (calculated)
9.832
GRAVY (calculated)
-0.660
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MINVAIDQES PFRELNIKNR RVMEEEEKWP PWLRPLLSTR FFVQCKLHAD SHKSECNMYC LDCTSGALCS RCLSHHGDHR AIQIRRSSYH DVIRVSEIQK
101: VLDITGVQTY IINSARVVFL NERPQPKPGK GVTNTCEVCN RSLLDSFRFC SLGCKIAGTA SDYSRNRKNS KKKKKKSTAG SDSEEYCTSA SSGSDKSHDG
201: TQSFTPSTPS PTAARLRSSK RRKGIPHRAP FGSLMLEF
101: VLDITGVQTY IINSARVVFL NERPQPKPGK GVTNTCEVCN RSLLDSFRFC SLGCKIAGTA SDYSRNRKNS KKKKKKSTAG SDSEEYCTSA SSGSDKSHDG
201: TQSFTPSTPS PTAARLRSSK RRKGIPHRAP FGSLMLEF
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.