Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0233g00100.t01 | Wine grape | cytosol | 41.2 | 70.59 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 61.37 | 57.2 |
| KRG88921 | Soybean | nucleus | 57.94 | 55.79 |
| VIT_02s0154g00150.t01 | Wine grape | nucleus | 55.79 | 53.28 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 49.36 | 50.88 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 53.65 | 50.0 |
| KRH75326 | Soybean | extracellular, plasma membrane | 59.23 | 49.82 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.21 | 49.33 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 47.64 | 48.26 |
| Bra014478.1-P | Field mustard | cytosol | 51.07 | 47.98 |
| CDX89067 | Canola | cytosol | 51.07 | 47.98 |
| Bra007550.1-P | Field mustard | extracellular, nucleus, vacuole | 47.21 | 47.83 |
| CDY48369 | Canola | cytosol | 51.07 | 47.79 |
| AT3G60670.1 | Thale cress | cytosol | 50.21 | 47.76 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 42.92 | 47.17 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 45.49 | 46.49 |
| CDX71792 | Canola | cytosol | 48.07 | 46.09 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 47.21 | 45.27 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 47.64 | 44.76 |
| KRH28037 | Soybean | cytosol, nucleus, plastid | 44.64 | 42.8 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 33.48 | 40.84 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 43.78 | 40.8 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 46.78 | 38.38 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 46.35 | 37.89 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 32.62 | 37.62 |
| GSMUA_AchrUn_... | Banana | cytosol | 32.19 | 37.13 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.62 | 35.51 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 30.9 | 33.49 |
| GSMUA_AchrUn_... | Banana | cytosol | 30.9 | 33.18 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 26.18 | 33.15 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 32.19 | 33.04 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 33.91 | 32.64 |
| GSMUA_Achr5P18120_001 | Banana | nucleus | 33.48 | 32.5 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 31.76 | 32.17 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 32.62 | 31.93 |
| GSMUA_Achr11P... | Banana | nucleus | 32.19 | 31.12 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 32.62 | 30.52 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 33.05 | 30.08 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 31.76 | 29.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P04210_001 | EnsemblPlants:GSMUA_Achr11T04210_001 | EnsemblPlantsGene:GSMUA_Achr11G04210_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF1 |
| PFAM:PF04640 | SEG:seg | UniParc:UPI0002957BC4 | UniProt:M0RPA1 | MapMan:15.5.43 | : |
Description
PLATZ transcription factor family protein [Source:Projected from Arabidopsis thaliana (AT3G60670) TAIR;Acc:AT3G60670]
Coordinates
chr11:-:3079196..3080223
Molecular Weight (calculated)
25485.4 Da
IEP (calculated)
8.606
GRAVY (calculated)
-0.397
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGWLEAMLG EKFFNPCMIH ETSKKNEKNI FCLDCCSSFC PQCLPPHRSH RLLQVRRYVY HDVVRVDDLE KLIDCSSVQS YTTNSAKVVF LNERPPSRPF
101: RGSGNACLSC YRPLQDPYFF CSLSCKVKEL LRSEGGLWKE LRECESLPLS CELDEGQLTP DSILESASAT SSASSGGGAA AATPVAAGSE AASRRKKRTG
201: AGSGSGRRGG DRAALPEMAS RRKKGVPVRA PLF
101: RGSGNACLSC YRPLQDPYFF CSLSCKVKEL LRSEGGLWKE LRECESLPLS CELDEGQLTP DSILESASAT SSASSGGGAA AATPVAAGSE AASRRKKRTG
201: AGSGSGRRGG DRAALPEMAS RRKKGVPVRA PLF
001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
Arabidopsis Description
At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.