Factsheet for GSMUA_AchrUn_randomP24560_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P36360_001	Banana	cytosol	77.23	77.23
GSMUA_Achr7P20650_001	Banana	cytosol	68.81	75.54
GSMUA_Achr9P12280_001	Banana	cytosol	70.3	62.56
PGSC0003DMT400025721	Potato	plastid	50.99	59.2
Bra012263.1-P	Field mustard	cytosol	57.92	58.79
CDY01340	Canola	cytosol	65.35	56.65
Bra025865.1-P	Field mustard	cytosol	67.82	56.15
CDY29486	Canola	cytosol	67.82	56.15
Bra003715.1-P	Field mustard	nucleus	45.54	55.76
CDY04591	Canola	cytosol	67.33	55.74
TraesCS7D01G390300.1	Wheat	cytosol	65.35	54.55
TraesCS7A01G394800.1	Wheat	cytosol	65.35	54.55
CDY00356	Canola	cytosol	65.84	54.51
AT1G21000.1	Thale cress	cytosol	65.84	54.06
TraesCS7B01G296800.1	Wheat	cytosol	64.36	53.72
Bra016441.1-P	Field mustard	cytosol	64.36	53.5
CDX87583	Canola	nucleus	62.87	53.36
Bra015731.1-P	Field mustard	nucleus	62.87	53.36
Os06t0624900-01	Rice	cytosol	66.83	53.36
CDX88300	Canola	nucleus	62.38	53.16
CDY33661	Canola	cytosol	63.86	53.09
CDX68093	Canola	nucleus	62.38	52.72
HORVU7Hr1G093120.4	Barley	cytosol	61.88	52.3
AT1G76590.1	Thale cress	cytosol	62.87	51.84
OQU76729	Sorghum	cytosol, plastid	65.35	51.56
CDX85958	Canola	nucleus	61.39	49.6
AT1G43000.2	Thale cress	cytosol	53.96	48.88
CDX96610	Canola	cytosol	63.86	48.86
GSMUA_Achr5P18120_001	Banana	nucleus	56.44	47.5
GSMUA_Achr8P14740_001	Banana	cytosol	53.96	47.39
GSMUA_Achr5P03420_001	Banana	cytosol	55.45	47.06
GSMUA_Achr4P27280_001	Banana	nucleus	55.94	45.38
GSMUA_Achr5P13970_001	Banana	nucleus	53.47	44.63
GSMUA_Achr2P18160_001	Banana	plasma membrane	54.95	43.87
GSMUA_Achr11P...	Banana	nucleus	51.98	43.57
GSMUA_Achr4P19110_001	Banana	nucleus	54.46	42.97
GSMUA_AchrUn_...	Banana	cytosol	46.04	42.86
GSMUA_Achr7P04460_001	Banana	extracellular	44.55	41.86
VIT_18s0122g00320.t01	Wine grape	cytosol	63.37	38.91
GSMUA_AchrUn_...	Banana	nucleus	36.14	34.11
GSMUA_AchrUn_...	Banana	nucleus	37.13	33.63
GSMUA_Achr2P02580_001	Banana	nucleus	35.15	33.49
GSMUA_Achr9P30790_001	Banana	nucleus	37.62	33.33
GSMUA_Achr7P03600_001	Banana	nucleus	37.13	33.19
GSMUA_Achr11P...	Banana	cytosol	37.13	32.19
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	37.62	31.28
CDY06424	Canola	cytosol	34.65	30.7
GSMUA_Achr6P20140_001	Banana	extracellular	28.71	30.37
GSMUA_Achr9P22490_001	Banana	mitochondrion	35.64	29.03
GSMUA_Achr6P30690_001	Banana	nucleus	35.15	28.4
GSMUA_Achr6P35220_001	Banana	nucleus	38.12	27.02
GSMUA_Achr1P09990_001	Banana	nucleus, plastid	35.15	25.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP24560_001	EnsemblPlants:GSMUA_AchrUn_randomT24560_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG24560_001	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF12
PFAM:PF04640	SEG:seg	UniParc:UPI0002960A6F	UniProt:M0UC14	MapMan:15.5.43	:

Description

Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG24560_001]

Coordinates

chrchrUn_random:+:122721242..122722017

Molecular Weight (calculated)

22630.1 Da

IEP (calculated)

8.682

GRAVY (calculated)

-0.451

Length

202 amino acids

Sequence
(BLAST)

001: MGPPWLRPLL KASFFHSCEI HGDSSKSECN LYCLDCMGDA LCSYCLPDHS DHHVVQIRRS SYHNVIRVSE VSKLIDISCI QTYIINSAKI VFLNERPQPR
101: PGKGVTNTCE ICCRTLLDSF RFCSIGCKLR GLRTDPELTF KLRAKPSREL AHGSDSDDEL RTPRKVAKTS NEGSSSISSG TPPTISYRTH PRKGIPHRSP
201: LQ

Best Arabidopsis Sequence Match ( AT1G21000.2 )
(BLAST)

001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF

Arabidopsis Description

At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.