Factsheet for Bra015731.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87583	Canola	nucleus	99.58	99.58
CDX88300	Canola	nucleus	99.16	99.58
AT1G76590.1	Thale cress	cytosol	89.92	87.35
Bra025865.1-P	Field mustard	cytosol	83.61	81.56
Bra016441.1-P	Field mustard	cytosol	83.19	81.48
Bra012263.1-P	Field mustard	cytosol	68.07	81.41
Bra003715.1-P	Field mustard	nucleus	55.04	79.39
GSMUA_Achr7P20650_001	Banana	cytosol	52.52	67.93
PGSC0003DMT400025721	Potato	plastid	49.16	67.24
GSMUA_Achr6P36360_001	Banana	cytosol	54.62	64.36
GSMUA_Achr9P12280_001	Banana	cytosol	60.08	63.0
GSMUA_AchrUn_...	Banana	cytosol	53.36	62.87
Bra035494.1-P	Field mustard	nucleus	49.58	53.88
Bra011992.1-P	Field mustard	nucleus	41.6	52.38
TraesCS7D01G390300.1	Wheat	cytosol	52.94	52.07
TraesCS7A01G394800.1	Wheat	cytosol	52.94	52.07
Bra012632.1-P	Field mustard	nucleus	46.22	51.4
Os06t0624900-01	Rice	cytosol	54.62	51.38
Bra021029.1-P	Field mustard	nucleus	48.32	51.34
TraesCS7B01G296800.1	Wheat	cytosol	52.1	51.24
HORVU7Hr1G093120.4	Barley	cytosol	51.26	51.05
Bra034379.1-P	Field mustard	nucleus	40.76	50.79
OQU76729	Sorghum	cytosol, plastid	53.78	50.0
Bra013266.1-P	Field mustard	nucleus	47.06	49.34
VIT_18s0122g00320.t01	Wine grape	cytosol	63.03	45.59
Bra025003.1-P	Field mustard	nucleus	42.44	44.69
Bra022055.1-P	Field mustard	nucleus	41.6	44.39
Bra017531.1-P	Field mustard	nucleus	42.44	44.1
Bra022058.1-P	Field mustard	nucleus	41.6	43.23
Bra023280.1-P	Field mustard	mitochondrion	50.0	42.05
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	31.51	31.25
Bra014899.1-P	Field mustard	nucleus	31.09	30.08
Bra037203.1-P	Field mustard	cytosol	31.09	29.02
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	27.73	28.7
Bra014478.1-P	Field mustard	cytosol	29.41	28.23
Bra013149.1-P	Field mustard	cytosol	31.09	26.71
Bra023155.1-P	Field mustard	nucleus	23.95	17.54

Protein Annotations

EnsemblPlants:Bra015731.1	EnsemblPlants:Bra015731.1-P	EnsemblPlantsGene:Bra015731	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF12
PFAM:PF04640	UniParc:UPI00025420DF	UniProt:M4DGV5	MapMan:15.5.43	:	:

Description

AT1G76590 (E=2e-123) | zinc-binding family protein

Coordinates

chrA07:+:21122138..21123216

Molecular Weight (calculated)

26800.8 Da

IEP (calculated)

8.955

GRAVY (calculated)

-0.518

Length

238 amino acids

Sequence
(BLAST)

001: MMRAEEESPP PWLIPLLRAN YFVPCSIHAD SNKSECNMFC LDCTSSSFCS YCLTNHKNHR VLQIRRSSYH NVVRVNEIQK YIDISCVQTY IINSARIVFL
101: NERPQPRIGK GVTNTCEICC RSLLDSFRFC SLGCKLGGMK RGNQSLTFSL KGKHGREYQA GEDSDEATTP TKIRKTCAFN RLMSGLSIST AKSDYFSGDQ
201: WSSSSGDESG FNLSPGTPPI YNHRNSSRRK GVPHRAPF

Best Arabidopsis Sequence Match ( AT1G76590.1 )
(BLAST)

001: MGPMMMRAEE DNYNLNPPPW LIPMLRANYF IPCSIHAASN KSECNMFCLD CSSEAFCSYC LLNHRNHRVL QIRRSSYHNV VRVNEIQKYI DISCVQTYII
101: NSARIVFLNE RPQPRIGKGV TNTCEICCRS LLDSFRFCSL GCKLGGMKRD PSLTFSLRGK HGREYEGEWE SDEATTPTKI RKTCAFNRLM SGLSISTVKC
201: DYLSGDQPSS SSGDESGFKL SPGTPPIYNH RNSSRRKGVP HRAPF

Arabidopsis Description

At1g76590 [Source:UniProtKB/TrEMBL;Acc:Q2HIW3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.