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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • nucleus 2
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr7P20650_001 Banana cytosol 63.79 60.33
GSMUA_Achr6P36360_001 Banana cytosol 60.34 51.98
GSMUA_AchrUn_... Banana cytosol 59.2 50.99
Bra003715.1-P Field mustard nucleus 47.13 49.7
CDX88300 Canola nucleus 67.24 49.37
CDY01340 Canola cytosol 66.09 49.36
Bra012263.1-P Field mustard cytosol 56.32 49.25
CDX87583 Canola nucleus 67.24 49.16
Bra015731.1-P Field mustard nucleus 67.24 49.16
Bra016441.1-P Field mustard cytosol 67.24 48.15
Bra025865.1-P Field mustard cytosol 67.24 47.95
CDY29486 Canola cytosol 67.24 47.95
CDY33661 Canola cytosol 66.67 47.74
CDY04591 Canola cytosol 66.67 47.54
CDX68093 Canola nucleus 64.94 47.28
CDY00356 Canola cytosol 66.09 47.13
GSMUA_Achr9P12280_001 Banana cytosol 60.34 46.26
CDX85958 Canola nucleus 64.94 45.2
CDX96610 Canola cytosol 66.67 43.94
PGSC0003DMT400022166 Potato extracellular 50.57 42.93
PGSC0003DMT400045164 Potato nucleus 55.75 42.73
AT1G43000.2 Thale cress cytosol 54.02 42.15
TraesCS7A01G394800.1 Wheat cytosol 58.05 41.74
TraesCS7D01G390300.1 Wheat cytosol 58.05 41.74
PGSC0003DMT400019836 Potato nucleus 53.45 41.7
TraesCS7B01G296800.1 Wheat cytosol 57.47 41.32
PGSC0003DMT400046007 Potato cytosol 52.3 40.62
HORVU7Hr1G093120.4 Barley cytosol 54.6 39.75
Os06t0624900-01 Rice cytosol 57.47 39.53
OQU76729 Sorghum cytosol, plastid 56.9 38.67
VIT_18s0122g00320.t01 Wine grape cytosol 64.37 34.04
PGSC0003DMT400075780 Potato nucleus 32.18 27.45
PGSC0003DMT400089328 Potato vacuole 24.71 27.04
PGSC0003DMT400020401 Potato cytosol 35.63 25.2
PGSC0003DMT400090715 Potato cytosol 15.52 25.0
PGSC0003DMT400097455 Potato cytosol 15.52 25.0
CDY06424 Canola cytosol 31.03 23.68
Protein Annotations
EnsemblPlants:PGSC0003DMT400025721EnsemblPlantsGene:PGSC0003DMG400009931InterPro:DUF597PANTHER:PTHR31065PANTHER:PTHR31065:SF12PFAM:PF04640
PGSC:PGSC0003DMG400009931UniParc:UPI000294832CUniProt:M1ALX8MapMan:15.5.43::
Description
Zinc-binding family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009931]
Coordinates
chr4:+:72051575..72053184
Molecular Weight (calculated)
20371.3 Da
IEP (calculated)
8.994
GRAVY (calculated)
-0.706
Length
174 amino acids
Sequence
(BLAST)
001: MYCLDCMGSN ALCSYCLTNH KHHRLVQIRR SSYHNVVRVN EIQRYLDISC IQTYIINSAK IVFLNERPQP RPGKGVTNTC EICCRSLLDT FRFCSLGCKL
101: NGIRRGDEEL TFTLKAETNE YWDDESSTPK KKQRRDEKVT FGFRHLNIEA YNMSPDTYHN NSNRRKGIPH RAPF
Best Arabidopsis Sequence Match ( AT1G21000.1 )
(BLAST)
001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.