Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G394800.1 | Wheat | cytosol | 99.17 | 99.17 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 98.76 | 98.76 |
| HORVU7Hr1G093120.4 | Barley | cytosol | 94.21 | 95.4 |
| OQU76729 | Sorghum | cytosol, plastid | 84.71 | 80.08 |
| Os06t0624900-01 | Rice | cytosol | 82.64 | 79.05 |
| GSMUA_AchrUn_... | Banana | cytosol | 54.55 | 65.35 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 49.17 | 64.67 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 53.72 | 64.36 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 58.68 | 62.56 |
| Bra012263.1-P | Field mustard | cytosol | 48.35 | 58.79 |
| CDY01340 | Canola | cytosol | 56.2 | 58.37 |
| PGSC0003DMT400025721 | Potato | plastid | 41.74 | 58.05 |
| CDY00356 | Canola | cytosol | 57.02 | 56.56 |
| CDY04591 | Canola | cytosol | 57.02 | 56.56 |
| CDY29486 | Canola | cytosol | 57.02 | 56.56 |
| Bra025865.1-P | Field mustard | cytosol | 57.02 | 56.56 |
| AT1G21000.1 | Thale cress | cytosol | 57.44 | 56.5 |
| Bra016441.1-P | Field mustard | cytosol | 56.61 | 56.38 |
| CDY33661 | Canola | cytosol | 56.2 | 55.97 |
| Bra003715.1-P | Field mustard | nucleus | 36.36 | 53.33 |
| CDX88300 | Canola | nucleus | 52.07 | 53.16 |
| CDX87583 | Canola | nucleus | 52.07 | 52.94 |
| Bra015731.1-P | Field mustard | nucleus | 52.07 | 52.94 |
| CDX68093 | Canola | nucleus | 52.07 | 52.72 |
| CDX96610 | Canola | cytosol | 56.61 | 51.89 |
| AT1G76590.1 | Thale cress | cytosol | 52.07 | 51.43 |
| CDX85958 | Canola | nucleus | 51.24 | 49.6 |
| AT1G43000.2 | Thale cress | cytosol | 45.04 | 48.88 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 47.11 | 45.78 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 39.67 | 45.5 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 45.45 | 44.72 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 38.02 | 42.79 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 37.6 | 41.55 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 36.78 | 41.4 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 43.8 | 39.85 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 52.48 | 38.6 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 30.99 | 38.46 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 33.88 | 37.44 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 39.67 | 36.09 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 34.71 | 33.6 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 32.64 | 32.51 |
| CDY06424 | Canola | cytosol | 29.75 | 31.58 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 32.23 | 30.71 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 29.75 | 30.38 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 24.38 | 29.06 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G390300.1 | EnsemblPlantsGene:TraesCS7D01G390300 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF12 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr7D:-:505599813..505604691
Molecular Weight (calculated)
26934.3 Da
IEP (calculated)
9.273
GRAVY (calculated)
-0.462
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMVSVQQSP MVRSEEDLGP PWLRPLLGTS FFVPCPAHPD LSKNECNLFC LGCNHAAGAL CSYCVPAHRD HHVVQIRRSS YHNVIRVSEV GKLIDIAHVQ
101: TYVINSAKIV FLNGRPQARP GKGVTNTCEI CCRSLPDSFR FCSLGCKLGG MQWDPTLTFA IRPKRSQDSG GEGYGSDDDS FSPRKQLRRA GFELGRFDRG
201: VRWSDDEGSK SNTRPMTPTT PPISRCRPSR RKGIPHRAPF YG
101: TYVINSAKIV FLNGRPQARP GKGVTNTCEI CCRSLPDSFR FCSLGCKLGG MQWDPTLTFA IRPKRSQDSG GEGYGSDDDS FSPRKQLRRA GFELGRFDRG
201: VRWSDDEGSK SNTRPMTPTT PPISRCRPSR RKGIPHRAPF YG
001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.