Factsheet for TraesCS6D01G146600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G156600.1	Wheat	cytosol	94.24	94.24
GSMUA_Achr7P03600_001	Banana	nucleus	68.31	73.45
TraesCS7D01G466400.1	Wheat	nucleus	75.72	72.44
EES04603	Sorghum	nucleus	76.54	72.09
GSMUA_AchrUn_...	Banana	nucleus	64.2	69.96
Zm00001d015394_P001	Maize	cytosol	75.31	69.32
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	61.73	61.73
CDX98234	Canola	cytosol	41.98	59.3
Solyc02g068510.1.1	Tomato	cytosol	58.44	58.92
KRH42391	Soybean	nucleus	46.91	57.0
KRH58510	Soybean	nucleus	44.44	54.27
VIT_01s0011g01410.t01	Wine grape	nucleus	57.61	53.64
CDY27171	Canola	nucleus	52.26	52.92
CDY12444	Canola	nucleus	52.26	52.92
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	51.85	52.5
AT1G31040.1	Thale cress	nucleus	52.26	52.26
Bra014899.1-P	Field mustard	nucleus	51.85	51.22
CDY02353	Canola	mitochondrion, nucleus	38.68	50.81
KRH12195	Soybean	cytosol	51.85	49.41
KRH37216	Soybean	cytosol	51.85	48.84
CDY43172	Canola	nucleus	39.92	48.26
TraesCS6D01G134200.1	Wheat	nucleus	44.86	45.99
TraesCS7D01G390300.1	Wheat	cytosol	32.51	32.64
TraesCS6D01G230300.1	Wheat	cytosol	26.75	32.02
TraesCS3D01G505200.1	Wheat	extracellular	27.57	31.16
Bra023155.1-P	Field mustard	nucleus	41.15	30.77
TraesCS3D01G505000.1	Wheat	extracellular	27.16	30.7
TraesCS6D01G157400.1	Wheat	cytosol, mitochondrion	26.34	30.33
TraesCS6D01G250500.1	Wheat	nucleus	30.04	29.32
TraesCS2D01G447400.1	Wheat	cytosol	29.63	29.27
TraesCS2D01G496700.1	Wheat	extracellular	23.46	29.23
TraesCS6D01G157500.1	Wheat	cytosol	25.93	28.77
TraesCS2D01G496600.1	Wheat	mitochondrion	25.1	27.85
TraesCS1D01G196400.1	Wheat	cytosol, mitochondrion, nucleus	28.81	26.32
TraesCS7D01G279600.1	Wheat	cytosol	26.75	24.44
TraesCS1D01G069600.1	Wheat	cytosol, nucleus, plastid	24.28	23.6

Protein Annotations

EnsemblPlants:TraesCS6D01G146600.1	EnsemblPlantsGene:TraesCS6D01G146600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008270	InterPro:DUF597	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31065
PANTHER:PTHR31065:SF32	PFAM:PF04640	PFscan:PS50119	SEG:seg	MapMan:15.5.43	:

Description

No Description!

Coordinates

chr6D:+:118267326..118270509

Molecular Weight (calculated)

26552.9 Da

IEP (calculated)

8.679

GRAVY (calculated)

-0.366

Length

243 amino acids

Sequence
(BLAST)

001: MGMRVPGWVG GLVEESFFVG CEAHESRRKN EKNIFCLACC TSICPHCGPA HRHHPLLQVR RYVYNDVVRL GDLEKLIDCS YVQPYTINSA KVIFLKPRPQ
101: SRPFKGTGNV CLACDRILQE PFHFCCLSCK VDHVVEQGGD LSNILLYRAG DELPFPRFEN LHVGDADSGQ VTPNSILENP LHHRNRYGGG SGGSSDNAGN
201: GGNGNGGGEA VVVKRKKGGG FFPKMVLSLG NRRKGAPHRS PLA

Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)

001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.