Factsheet for Bra038403.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27171	Canola	nucleus	97.5	97.5
Bra014899.1-P	Field mustard	nucleus	90.83	88.62
CDY02353	Canola	mitochondrion, nucleus	65.0	84.32
CDY43172	Canola	nucleus	65.0	77.61
KRH42391	Soybean	nucleus	52.08	62.5
KRH58510	Soybean	nucleus	50.83	61.31
VIT_01s0011g01410.t01	Wine grape	nucleus	65.42	60.15
GSMUA_AchrUn_...	Banana	nucleus	55.83	60.09
KRH12195	Soybean	cytosol	63.75	60.0
GSMUA_Achr7P03600_001	Banana	nucleus	55.83	59.29
KRH37216	Soybean	cytosol	63.33	58.91
Solyc02g068510.1.1	Tomato	cytosol	57.92	57.68
GSMUA_Achr2P02580_001	Banana	nucleus	49.17	55.66
Bra023155.1-P	Field mustard	nucleus	74.17	54.77
GSMUA_Achr9P30790_001	Banana	nucleus	51.25	53.95
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	53.75	53.09
TraesCS6A01G156600.1	Wheat	cytosol	52.5	51.85
TraesCS6D01G146600.1	Wheat	cytosol	52.5	51.85
GSMUA_Achr6P20140_001	Banana	extracellular	41.25	51.83
Os02t0172800-01	Rice	cytosol	50.83	50.62
EES04603	Sorghum	nucleus	53.75	50.0
EER90181	Sorghum	cytosol	51.25	49.8
HORVU7Hr1G108680.1	Barley	nucleus	52.5	49.61
Zm00001d046958_P001	Maize	nucleus	51.67	49.6
TraesCS7A01G479100.1	Wheat	nucleus	52.5	49.41
TraesCS7B01G381500.1	Wheat	nucleus	52.5	49.22
TraesCS7D01G466400.1	Wheat	nucleus	52.08	49.21
Os06t0666100-01	Rice	nucleus	53.33	49.04
Zm00001d015394_P001	Maize	cytosol	52.5	47.73
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	37.92	39.57
Bra034379.1-P	Field mustard	nucleus	31.25	39.27
Bra014478.1-P	Field mustard	cytosol	40.42	39.11
Bra037203.1-P	Field mustard	cytosol	41.25	38.82
Bra003715.1-P	Field mustard	nucleus	25.83	37.58
Bra011992.1-P	Field mustard	nucleus	28.75	36.51
Bra013149.1-P	Field mustard	cytosol	41.67	36.1
Bra012632.1-P	Field mustard	nucleus	30.42	34.11
Bra021029.1-P	Field mustard	nucleus	31.25	33.48
Bra035494.1-P	Field mustard	nucleus	30.0	32.88
Bra017531.1-P	Field mustard	nucleus	31.25	32.75
Bra025003.1-P	Field mustard	nucleus	30.83	32.74
Bra013266.1-P	Field mustard	nucleus	30.83	32.6
Bra022055.1-P	Field mustard	nucleus	29.58	31.84
Bra015731.1-P	Field mustard	nucleus	31.25	31.51
Bra022058.1-P	Field mustard	nucleus	29.17	30.57
Bra012263.1-P	Field mustard	cytosol	25.0	30.15
Bra025865.1-P	Field mustard	cytosol	29.17	28.69
Bra016441.1-P	Field mustard	cytosol	28.75	28.4
Bra023280.1-P	Field mustard	mitochondrion	30.0	25.44

Protein Annotations

EnsemblPlants:Bra038403.1	EnsemblPlants:Bra038403.1-P	EnsemblPlantsGene:Bra038403	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF32
PFAM:PF04640	SEG:seg	UniParc:UPI000254692F	UniProt:M4FBD7	MapMan:15.5.43	:

Description

AT1G31040 (E=3e-107) | unknown protein

Coordinates

chrA08:+:9106833..9109041

Molecular Weight (calculated)

27734.3 Da

IEP (calculated)

7.186

GRAVY (calculated)

-0.522

Length

240 amino acids

Sequence
(BLAST)

001: MMREGHEEEE MMMMLAKKPA WLEGLMAETF FSSCGIHESR RKSEKNVFCL LCCLSVCPHC LTSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYIQPYTI
101: NGAKVIFINQ RPQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLQYQG DDLSSILYRI DESDFTFSSL RMDGHDQLGE ISTMEEDTDD IMVMSDQWEQ
201: GNNSNKKEKT KKKKESKYSP GMVLSLGSRR KGAPHRAPFS

Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)

001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.