Factsheet for Bra014478.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89067	Canola	cytosol	98.79	98.79
CDY48369	Canola	cytosol	95.97	95.58
Bra007550.1-P	Field mustard	extracellular, nucleus, vacuole	81.45	87.83
AT3G60670.1	Thale cress	cytosol	82.26	83.27
VIT_00s0233g00100.t01	Wine grape	cytosol	36.69	66.91
VIT_15s0048g00580.t01	Wine grape	nucleus	55.65	55.2
KRG88921	Soybean	nucleus	52.82	54.13
VIT_02s0154g00150.t01	Wine grape	nucleus	52.02	52.87
GSMUA_Achr11P...	Banana	cytosol	47.98	51.07
Solyc01g091000.2.1	Tomato	cytosol, nucleus, plasma membrane	49.19	48.8
KRH75326	Soybean	extracellular, plasma membrane	54.03	48.38
Bra037203.1-P	Field mustard	cytosol	43.55	42.35
KRH28037	Soybean	cytosol, nucleus, plastid	39.92	40.74
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	39.11	40.42
Bra013149.1-P	Field mustard	cytosol	44.76	40.07
Bra014899.1-P	Field mustard	nucleus	37.9	38.21
Bra012632.1-P	Field mustard	nucleus	31.05	35.98
Bra003715.1-P	Field mustard	nucleus	23.79	35.76
Bra034379.1-P	Field mustard	nucleus	27.02	35.08
Bra013266.1-P	Field mustard	nucleus	31.85	34.8
Bra035494.1-P	Field mustard	nucleus	30.24	34.25
Bra021029.1-P	Field mustard	nucleus	30.65	33.93
Bra022055.1-P	Field mustard	nucleus	30.24	33.63
Bra011992.1-P	Field mustard	nucleus	25.4	33.33
Bra022058.1-P	Field mustard	nucleus	29.84	32.31
Bra025003.1-P	Field mustard	nucleus	29.44	32.3
Bra017531.1-P	Field mustard	nucleus	29.44	31.88
Bra012263.1-P	Field mustard	cytosol	23.79	29.65
Bra015731.1-P	Field mustard	nucleus	28.23	29.41
Bra025865.1-P	Field mustard	cytosol	28.23	28.69
Bra016441.1-P	Field mustard	cytosol	27.82	28.4
Bra023280.1-P	Field mustard	mitochondrion	31.85	27.92
Bra023155.1-P	Field mustard	nucleus	30.24	23.08

Protein Annotations

EnsemblPlants:Bra014478.1	EnsemblPlants:Bra014478.1-P	EnsemblPlantsGene:Bra014478	InterPro:DUF597	PANTHER:PTHR31065	PANTHER:PTHR31065:SF1
PFAM:PF04640	UniParc:UPI0002543C08	UniProt:M4DDB0	MapMan:15.5.43	:	:

Description

AT3G60670 (E=5e-116) | zinc-binding protein, putative

Coordinates

chrA04:+:886990..888431

Molecular Weight (calculated)

27963.5 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.246

Length

248 amino acids

Sequence
(BLAST)

001: MGLGSILQME PKDFPAWLEV LLKEKFFNAC LDHEDVKKNE KNILCIDCCL SICPHCLPSH NSHRLLQIRR YVYNDVLRVE DGSKLMDCSL IQPYITNSSK
101: VVFINERPHS RQFRGSGNFC YTCDRSLQSP YVFCSLSCKI SDVIMRQRGL SGFLHVCNFL HLTDEGATST TPSSTLEATE SDGDVGVDMF WCQALACTAS
201: TEVVRKKRSS LSATCRRVTT AVASTNTEAP VNFFNRRKNT PPQRAPLY

Best Arabidopsis Sequence Match ( AT3G60670.1 )
(BLAST)

001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY

Arabidopsis Description

At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.