Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plasma membrane 3
- plastid 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88921 | Soybean | nucleus | 82.31 | 94.21 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 69.68 | 77.2 |
| Solyc01g091000.2.1 | Tomato | cytosol, nucleus, plasma membrane | 59.93 | 66.4 |
| GSMUA_Achr11P... | Banana | cytosol | 49.82 | 59.23 |
| AT3G60670.1 | Thale cress | cytosol | 50.9 | 57.55 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 45.49 | 54.78 |
| CDX71792 | Canola | cytosol | 48.01 | 54.73 |
| Bra007550.1-P | Field mustard | extracellular, nucleus, vacuole | 45.13 | 54.35 |
| CDY48369 | Canola | cytosol | 48.74 | 54.22 |
| Bra014478.1-P | Field mustard | cytosol | 48.38 | 54.03 |
| CDX89067 | Canola | cytosol | 48.01 | 53.63 |
| KRH42391 | Soybean | nucleus | 35.38 | 49.0 |
| KRH58510 | Soybean | nucleus | 35.02 | 48.74 |
| KRH20236 | Soybean | nucleus | 43.32 | 48.58 |
| KRH37851 | Soybean | nucleus | 41.88 | 48.54 |
| KRH03576 | Soybean | nucleus | 43.32 | 48.39 |
| KRH12861 | Soybean | nucleus | 41.52 | 48.12 |
| KRH28037 | Soybean | cytosol, nucleus, plastid | 40.07 | 45.68 |
| KRH37216 | Soybean | cytosol | 40.79 | 43.8 |
| KRH12195 | Soybean | cytosol | 39.71 | 43.14 |
| KRH75604 | Soybean | nucleus | 29.96 | 39.52 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 29.6 | 36.77 |
| KRH24008 | Soybean | cytosol | 29.24 | 36.32 |
| KRH39550 | Soybean | nucleus | 29.96 | 35.17 |
| KRH74408 | Soybean | nucleus | 29.96 | 35.17 |
| KRH19979 | Soybean | cytosol | 26.35 | 34.93 |
| KRH27687 | Soybean | cytosol | 28.88 | 34.33 |
| KRG96080 | Soybean | cytosol | 26.71 | 33.79 |
| KRH32606 | Soybean | extracellular | 27.08 | 33.78 |
| KRH72960 | Soybean | nucleus | 11.91 | 32.67 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 25.99 | 32.58 |
| KRH25132 | Soybean | cytosol | 25.63 | 32.27 |
| KRH77790 | Soybean | nucleus | 29.24 | 32.27 |
| KRH13451 | Soybean | cytosol | 10.83 | 30.61 |
| KRH30543 | Soybean | nucleus | 19.86 | 30.56 |
| KRH45433 | Soybean | plastid | 23.47 | 27.78 |
| KRH49692 | Soybean | nucleus | 21.66 | 26.67 |
| KRH41746 | Soybean | nucleus | 20.58 | 23.95 |
| KRH60448 | Soybean | nucleus | 20.22 | 23.53 |
Protein Annotations
| EMBL:ACUP02000297 | EnsemblPlants:KRH75326 | EnsemblPlantsGene:GLYMA_01G078600 | EntrezGene:100787153 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0008270 | InterPro:DUF597 | InterPro:IPR000315 |
| InterPro:Znf_B-box | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF1 | PFAM:PF04640 | PFscan:PS50119 | ProteinID:KRH75326 |
| ProteinID:KRH75326.1 | SEG:seg | UniParc:UPI0002949C8B | UniProt:K7K2K4 | MapMan:15.5.43 | : |
Description
hypothetical protein
Coordinates
chr1:+:20387097..20389896
Molecular Weight (calculated)
30832.3 Da
IEP (calculated)
9.139
GRAVY (calculated)
-0.233
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVLKLIQFT LLTQTQIKIQ IAKEKKIIAM FVSSSSHVPR WLQVLLTEKF YNACIIHEGA KKNEKNVYCL DCCISLCPHC LSPHRSHRLL QIRRYVYHDV
101: IRLGDAAKLI DCNSVQSYTT NSAKVVFLNQ RPQTRNFRGS GNFCGTCDRS LQDPYHFCSL SCKINYLVRT TGSLCNYLFE CNYLPLPESG LDDGLMTPDS
201: VLEPAGSART SSGSGGYGGV DCRTTLACTA TTEIVRKKRT GGSTFRPPCR PACSPVSEIS AGLMNRRKGN PQRAPLY
101: IRLGDAAKLI DCNSVQSYTT NSAKVVFLNQ RPQTRNFRGS GNFCGTCDRS LQDPYHFCSL SCKINYLVRT TGSLCNYLFE CNYLPLPESG LDDGLMTPDS
201: VLEPAGSART SSGSGGYGGV DCRTTLACTA TTEIVRKKRT GGSTFRPPCR PACSPVSEIS AGLMNRRKGN PQRAPLY
001: MESGEFPAWL EVLLKDKFFN ACLDHEDDKK NEKNILCIDC CLTICPHCLS SHTSHRLLQI RRYVYRDVLR VEDGSKLMDC SLIQPYTTNS SKVVFINERP
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
101: QSRQFRGSGN ICITCDRSLQ SPYLFCCLSC KISDVIMRQR GLSGFLRVCN VLDLTDEVTT TTPSSTLEPT GSNRTSSESS GNEGEDMFWC QALACTATTE
201: IVRKKRSSLS TTCRRVTEVV STTNTEAPVN FLNRRKNPPQ RAPLY
Arabidopsis Description
At3g60670 [Source:UniProtKB/TrEMBL;Acc:Q9LZZ6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.