Factsheet for HORVU7Hr1G108680.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G466400.1	Wheat	nucleus	88.58	88.58
TraesCS7B01G381500.1	Wheat	nucleus	88.98	88.28
TraesCS7A01G479100.1	Wheat	nucleus	88.58	88.24
Os06t0666100-01	Rice	nucleus	79.53	77.39
EER90181	Sorghum	cytosol	73.62	75.71
Zm00001d046958_P001	Maize	nucleus	73.23	74.4
GSMUA_Achr7P03600_001	Banana	nucleus	65.35	73.45
GSMUA_AchrUn_...	Banana	nucleus	63.39	72.2
GSMUA_Achr8P33510_001	Banana	cytosol, mitochondrion, nucleus, plastid	59.84	62.55
CDX98234	Canola	cytosol	40.55	59.88
Solyc02g068510.1.1	Tomato	cytosol	53.94	56.85
KRH42391	Soybean	nucleus	44.49	56.5
VIT_01s0011g01410.t01	Wine grape	nucleus	56.3	54.79
KRH58510	Soybean	nucleus	42.13	53.77
CDY12444	Canola	nucleus	49.61	52.5
Bra038403.1-P	Field mustard	cytosol, extracellular, nucleus	49.61	52.5
AT1G31040.1	Thale cress	nucleus	50.0	52.26
CDY27171	Canola	nucleus	49.21	52.08
Bra014899.1-P	Field mustard	nucleus	49.61	51.22
CDY02353	Canola	mitochondrion, nucleus	36.61	50.27
KRH12195	Soybean	cytosol	50.39	50.2
KRH37216	Soybean	cytosol	49.61	48.84
CDY43172	Canola	nucleus	38.19	48.26
HORVU6Hr1G028520.1	Barley	cytosol, extracellular, nucleus	43.7	46.84
HORVU7Hr1G093120.4	Barley	cytosol	30.32	32.22
HORVU3Hr1G110200.1	Barley	extracellular	26.77	31.63
Bra023155.1-P	Field mustard	nucleus	38.19	29.85
HORVU7Hr1G059900.4	Barley	cytosol	24.02	28.37
HORVU1Hr1G050480.5	Barley	cytosol, nucleus	24.8	20.13
HORVU6Hr1G067060.3	Barley	nucleus, plastid	24.41	19.31

Protein Annotations

EnsemblPlants:HORVU7Hr1G108680.1	EnsemblPlantsGene:HORVU7Hr1G108680	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0008270	InterPro:DUF597	InterPro:IPR000315	InterPro:Znf_B-box	PANTHER:PTHR31065
PANTHER:PTHR31065:SF32	PFAM:PF04640	PFscan:PS50119	SEG:seg	UniParc:UPI000B474A5C	UniProt:A0A287XRH7
MapMan:15.5.43	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:626024156..626028678

Molecular Weight (calculated)

27885.4 Da

IEP (calculated)

8.613

GRAVY (calculated)

-0.302

Length

254 amino acids

Sequence
(BLAST)

001: MGMRPGWVGG LVEETFFVAC EAHESRKKNE KNIFCLACCT SICPHCAPAH RHHPLIQVRR YVYNDVVRLD DLEKLIDCSF VQPYTINSAK VIFLKPRPQS
101: RPFKGSGNIC LTCDRILQEP FHFCCLSCKV RTPHMQGGDL SNILYVSGEP DVACFPRFEN LRVGGGSADL LDDVDVAGGQ ITPNSILEVS LHHHYGGGSS
201: NNRSGGGSSR NARGFEAAAG ADVPRKKKSG GFFPQIVMSL NNRRKGAPHR SPFA

Best Arabidopsis Sequence Match ( AT1G31040.1 )
(BLAST)

001: MVREGEEEEE MMMMMATKPA WLEGLMAETF FSSCGIHETR RKSEKNVFCL LCCLSVCPHC LPSHRSHPLL QVRRYVYHDV VRLSDLEKLI DCSYVQPYTI
101: NGAKVIFLNQ RQQSRAKVSS NVCFTCDRIL QEPFHFCSLS CKVDYLSYQG DDLSSILYRI DESDFTFEGL RMDGHDQLGE ISTMEDGEDI LVISDESEQG
201: NNSHKKEKKK SKKKKPESNY LPGMVLSSLG NRRKGAPHRA PFS

Arabidopsis Description

PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4I7U9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.