Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 61.02 | 74.32 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 61.66 | 72.56 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 62.3 | 72.22 |
| Os10t0574700-01 | Rice | nucleus | 53.04 | 65.35 |
| Zm00001d030032_P002 | Maize | nucleus | 51.44 | 63.39 |
| EER91885 | Sorghum | nucleus | 52.4 | 63.08 |
| Zm00001d047025_P001 | Maize | nucleus | 51.76 | 62.07 |
| KRH13451 | Soybean | cytosol | 15.34 | 48.98 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 39.94 | 48.83 |
| HORVU7Hr1G059900.4 | Barley | cytosol | 26.84 | 39.07 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 26.52 | 38.6 |
| HORVU7Hr1G093120.4 | Barley | cytosol | 28.43 | 37.24 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 36.42 | 35.51 |
| KRH45433 | Soybean | plastid | 22.68 | 30.34 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 20.13 | 26.58 |
| HORVU7Hr1G108680.1 | Barley | nucleus | 20.13 | 24.8 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G050480.5 | EnsemblPlantsGene:HORVU1Hr1G050480 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF13 | PFAM:PF04640 |
| SEG:seg | UniParc:UPI000B47190A | UniProt:A0A287FIF4 | MapMan:15.5.43 | : | : |
Description
No Description!
Coordinates
chrchr1H:+:373727317..373729050
Molecular Weight (calculated)
33351.2 Da
IEP (calculated)
7.705
GRAVY (calculated)
-0.353
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: EEEEEEAAAA NKTHSSGSWC GAVRRAGMAI DHESPFKELR LKNRRIMGGG APEPEEEEAE PQVAAATAAG EEQQWPQWLR PLLSARFFAQ CKTHSESHRS
101: GECNMFCLDC AAGAAAGAAA LCSLCLAHGH RGHHTIQIRR SSYHDVIRVS DIQRFMDIAG VQTYVINSAR VVFLNERPQQ KQPGKGGGGG GAGSANLCEV
201: CSRSLLDNFR FCSLGCKVAG RLLLLSTAQC RQAQLHAVHA AAAAAASSGQ AAQGHPSPGA VRQPHHRLLG AHHPPLTSYD PHAQLQSEWG EKAATTSVPA
301: IAFGCASRCG FHQ
101: GECNMFCLDC AAGAAAGAAA LCSLCLAHGH RGHHTIQIRR SSYHDVIRVS DIQRFMDIAG VQTYVINSAR VVFLNERPQQ KQPGKGGGGG GAGSANLCEV
201: CSRSLLDNFR FCSLGCKVAG RLLLLSTAQC RQAQLHAVHA AAAAAASSGQ AAQGHPSPGA VRQPHHRLLG AHHPPLTSYD PHAQLQSEWG EKAATTSVPA
301: IAFGCASRCG FHQ
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.