Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91885 | Sorghum | nucleus | 88.19 | 86.15 |
| Zm00001d047025_P001 | Maize | nucleus | 86.22 | 83.91 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 74.8 | 73.93 |
| Os10t0574700-01 | Rice | nucleus | 73.23 | 73.23 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 74.02 | 70.68 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 74.8 | 70.37 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 55.51 | 55.08 |
| Zm00001d051511_P001 | Maize | nucleus | 53.54 | 54.18 |
| Zm00001d017682_P001 | Maize | nucleus | 53.15 | 53.57 |
| Zm00001d026047_P002 | Maize | nucleus | 53.15 | 53.36 |
| Zm00001d002489_P001 | Maize | nucleus | 52.76 | 52.34 |
| HORVU1Hr1G050480.5 | Barley | cytosol, nucleus | 63.39 | 51.44 |
| KRH13451 | Soybean | cytosol | 18.9 | 48.98 |
| Zm00001d031925_P001 | Maize | cytosol | 37.8 | 45.28 |
| Zm00001d009292_P001 | Maize | extracellular | 35.43 | 42.06 |
| KRH45433 | Soybean | plastid | 35.43 | 38.46 |
| Zm00001d015868_P001 | Maize | nucleus | 27.95 | 33.02 |
| Zm00001d015560_P001 | Maize | nucleus | 27.95 | 29.96 |
| Zm00001d051376_P001 | Maize | cytosol | 22.83 | 29.29 |
| Zm00001d046958_P001 | Maize | nucleus | 28.35 | 28.8 |
| Zm00001d015394_P001 | Maize | cytosol | 29.13 | 28.03 |
Protein Annotations
| EMBL:BT037167 | EMBL:KJ727643 | EnsemblPlants:Zm00001d030032_P002 | EnsemblPlants:Zm00001d030032_T002 | EnsemblPlantsGene:Zm00001d030032 | EntrezGene:100216682 |
| InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF13 | PFAM:PF04640 | ProteinID:ONM00064.1 | ProteinID:ONM00065.1 |
| SEG:seg | UniParc:UPI00017B7417 | UniProt:B4FJ79 | MapMan:15.5.43 | : | : |
Description
PLATZ-transcription factor 3PLATZ transcription factor family protein
Coordinates
chr1:+:101087719..101089690
Molecular Weight (calculated)
27853.0 Da
IEP (calculated)
8.690
GRAVY (calculated)
-0.428
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHESPFK ELRLKNRRIM GGGGPDPEPE EEEEVATAAY AGQWPRWLQP LLSARFFAHC RTHGDSHRSG ECNMFCLDCS AAGAGAGARA LCSLCLAQAH
101: RDHHTIQIRR SSYHDVIRVS DIQRFMDIAG VQTYVINSAR VVFLNERPQQ QRPGCKAASA SANLCEVCAR SLLDNFRFCS LGCKVVGCSP DAAKARSWLL
201: RPAVGGSGDG DSTSSSPLRD AQKRQSFTPP TPQPAKRRKG IPHRAPFGSF IVEY
101: RDHHTIQIRR SSYHDVIRVS DIQRFMDIAG VQTYVINSAR VVFLNERPQQ QRPGCKAASA SANLCEVCAR SLLDNFRFCS LGCKVVGCSP DAAKARSWLL
201: RPAVGGSGDG DSTSSSPLRD AQKRQSFTPP TPQPAKRRKG IPHRAPFGSF IVEY
001: MAIEDQENTI REIKPKNRRI MGAGGPEEEE NRWPPWLKPL LKEQFFVHCK FHGDSHKSEC NMYCLDCTNG PLCSLCLAHH KDHRTIQIRR SSYHDVIRVN
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
101: EIQKYLDIGG IQTYVINSAK VVFLNERPQP RPGKGVTNTC KVCYRSLVDD SFRFCSLGCK IAGTSRGFEK GRENLLMETE DSSSSIAIGK NITNLQSFSP
201: STPPLTTSSN CRIVKRRKGI PHRSPMG
Arabidopsis Description
At4g17900 [Source:UniProtKB/TrEMBL;Acc:Q0WUB8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.