Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12755 | Sorghum | nucleus | 89.06 | 90.84 |
| Os04t0591100-01 | Rice | nucleus | 84.77 | 87.15 |
| Zm00001d026047_P002 | Maize | nucleus | 85.94 | 86.96 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 78.91 | 82.11 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 78.52 | 81.71 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 78.52 | 81.71 |
| KRH75604 | Soybean | nucleus | 61.72 | 75.24 |
| Zm00001d017682_P001 | Maize | nucleus | 71.09 | 72.22 |
| Zm00001d051511_P001 | Maize | nucleus | 69.53 | 70.92 |
| PGSC0003DMT400045164 | Potato | nucleus | 60.55 | 68.28 |
| KRH74408 | Soybean | nucleus | 62.89 | 68.22 |
| KRH39550 | Soybean | nucleus | 62.89 | 68.22 |
| Solyc08g076860.2.1 | Tomato | nucleus | 60.55 | 67.98 |
| AT1G32700.1 | Thale cress | cytosol | 55.08 | 66.2 |
| Solyc06g061240.2.1 | Tomato | nucleus | 57.42 | 65.62 |
| PGSC0003DMT400019836 | Potato | nucleus | 57.03 | 65.47 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 58.98 | 65.37 |
| Bra035494.1-P | Field mustard | nucleus | 55.86 | 65.3 |
| CDY01500 | Canola | nucleus | 53.91 | 64.49 |
| PGSC0003DMT400046007 | Potato | cytosol | 56.25 | 64.29 |
| Bra012632.1-P | Field mustard | nucleus | 53.52 | 64.02 |
| KRH27687 | Soybean | cytosol | 58.2 | 63.95 |
| CDX90437 | Canola | nucleus | 53.12 | 63.55 |
| KRH24008 | Soybean | cytosol | 55.08 | 63.23 |
| KRH29309 | Soybean | cytoskeleton, cytosol, nucleus | 54.69 | 62.78 |
| AT4G17900.1 | Thale cress | nucleus | 55.47 | 62.56 |
| Solyc08g005100.2.1 | Tomato | cytosol | 54.69 | 62.5 |
| Bra021029.1-P | Field mustard | nucleus | 54.69 | 62.5 |
| CDX76551 | Canola | nucleus | 54.69 | 62.5 |
| CDY08880 | Canola | nucleus | 54.69 | 62.5 |
| CDX78810 | Canola | nucleus | 54.3 | 61.23 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 62.5 | 61.07 |
| CDY44504 | Canola | nucleus | 53.91 | 60.79 |
| KRH77790 | Soybean | nucleus | 59.38 | 60.56 |
| Bra013266.1-P | Field mustard | nucleus | 53.12 | 59.91 |
| CDY03199 | Canola | nucleus | 50.78 | 57.78 |
| CDY35177 | Canola | nucleus | 51.56 | 57.64 |
| Bra017531.1-P | Field mustard | nucleus | 51.17 | 57.21 |
| CDY69910 | Canola | nucleus | 49.61 | 56.19 |
| CDY69918 | Canola | nucleus | 49.22 | 55.75 |
| Bra025003.1-P | Field mustard | nucleus | 49.22 | 55.75 |
| Zm00001d030032_P002 | Maize | nucleus | 52.34 | 52.76 |
| CDY66745 | Canola | nucleus | 45.7 | 52.47 |
| Bra022055.1-P | Field mustard | nucleus | 45.7 | 52.47 |
| AT5G46710.1 | Thale cress | nucleus | 46.09 | 52.21 |
| Zm00001d047025_P001 | Maize | nucleus | 53.12 | 52.11 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 57.03 | 51.41 |
| CDY72135 | Canola | cytosol, nucleus | 42.58 | 50.7 |
| CDX87686 | Canola | nucleus | 45.7 | 50.65 |
| Bra023280.1-P | Field mustard | mitochondrion | 55.86 | 50.53 |
| CDY44664 | Canola | plasma membrane | 57.03 | 49.66 |
| Bra022058.1-P | Field mustard | nucleus | 44.14 | 49.34 |
| CDX87684 | Canola | nucleus | 44.53 | 48.51 |
| Zm00001d031925_P001 | Maize | cytosol | 37.11 | 44.81 |
| Zm00001d009292_P001 | Maize | extracellular | 35.55 | 42.52 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 48.44 | 34.07 |
| Zm00001d015560_P001 | Maize | nucleus | 30.08 | 32.49 |
| Zm00001d015868_P001 | Maize | nucleus | 26.56 | 31.63 |
| Zm00001d046958_P001 | Maize | nucleus | 28.91 | 29.6 |
| Zm00001d051376_P001 | Maize | cytosol | 22.66 | 29.29 |
| Zm00001d015394_P001 | Maize | cytosol | 30.08 | 29.17 |
Protein Annotations
| EnsemblPlants:Zm00001d002489_P001 | EnsemblPlants:Zm00001d002489_T001 | EnsemblPlantsGene:Zm00001d002489 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF10 |
| PFAM:PF04640 | ProteinID:ONM14536.1 | SEG:seg | UniParc:UPI000221D819 | UniProt:A0A1D6E1I7 | MapMan:15.5.43 |
Description
PLATZ-transcription factor 5PLATZ transcription factor family protein
Coordinates
chr2:+:13850163..13852195
Molecular Weight (calculated)
28319.5 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.648
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDDESPLR VNTRGGAMGG GERDGGENQR WPPWLKPLLG TSFFGQCKLH ADAHKSECNM YCLDCMNGAL CSQCLAYHRD HHAIQIRRSS YHDVIRVSEI
101: QKVLDISGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDTFR FCSLGCKIVR TSGDFRIRKK HAIVAKKKRE KKHAPQQKQH RGAADSADDD
201: DDDSSTSTSG GSDKSSVVQS FTPSTPPATT ANSFRAGKRR KGVPHRSPFG SLVVEF
101: QKVLDISGVQ TYIINSARVV FLNERPQPRP GKGVTNTCEV CERSLLDTFR FCSLGCKIVR TSGDFRIRKK HAIVAKKKRE KKHAPQQKQH RGAADSADDD
201: DDDSSTSTSG GSDKSSVVQS FTPSTPPATT ANSFRAGKRR KGVPHRSPFG SLVVEF
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.