Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG25377 | Sorghum | extracellular | 90.57 | 91.0 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 79.72 | 78.97 |
| Os08t0560300-01 | Rice | cytosol | 72.17 | 76.5 |
| Os11t0428700-00 | Rice | cytosol | 41.04 | 66.41 |
| HORVU7Hr1G059900.4 | Barley | cytosol | 66.51 | 65.58 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 79.25 | 62.92 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 78.77 | 62.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 61.79 | 60.37 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 59.43 | 58.6 |
| Bra011992.1-P | Field mustard | nucleus | 49.53 | 55.56 |
| KRH19979 | Soybean | cytosol | 54.72 | 55.5 |
| CDX71409 | Canola | nucleus | 49.06 | 55.32 |
| PGSC0003DMT400022166 | Potato | extracellular | 53.3 | 55.12 |
| Solyc10g085800.1.1 | Tomato | extracellular | 53.3 | 55.12 |
| CDY04518 | Canola | nucleus | 49.06 | 55.03 |
| Bra034379.1-P | Field mustard | nucleus | 49.06 | 54.45 |
| CDY30518 | Canola | cytosol | 48.58 | 53.93 |
| KRG96080 | Soybean | cytosol | 54.72 | 52.97 |
| KRH32606 | Soybean | extracellular | 54.25 | 51.8 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 53.77 | 51.58 |
| KRH25132 | Soybean | cytosol | 53.3 | 51.36 |
| Zm00001d009292_P001 | Maize | extracellular | 49.53 | 49.07 |
| KRH30543 | Soybean | nucleus | 36.79 | 43.33 |
| AT2G27930.5 | Thale cress | plastid | 38.21 | 42.19 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 45.75 | 42.17 |
| Zm00001d017682_P001 | Maize | nucleus | 45.28 | 38.1 |
| Zm00001d051511_P001 | Maize | nucleus | 44.81 | 37.85 |
| Zm00001d030032_P002 | Maize | nucleus | 45.28 | 37.8 |
| Zm00001d002489_P001 | Maize | nucleus | 44.81 | 37.11 |
| Zm00001d047025_P001 | Maize | nucleus | 44.81 | 36.4 |
| Zm00001d026047_P002 | Maize | nucleus | 43.4 | 36.36 |
| Zm00001d015868_P001 | Maize | nucleus | 32.08 | 31.63 |
| Zm00001d015560_P001 | Maize | nucleus | 33.49 | 29.96 |
| Zm00001d051376_P001 | Maize | cytosol | 25.94 | 27.78 |
| Zm00001d046958_P001 | Maize | nucleus | 32.55 | 27.6 |
| Zm00001d015394_P001 | Maize | cytosol | 33.49 | 26.89 |
Protein Annotations
| EMBL:EU966496 | EnsemblPlants:Zm00001d031925_P001 | EnsemblPlants:Zm00001d031925_T001 | EnsemblPlantsGene:Zm00001d031925 | EntrezGene:100277057 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF31 | PFAM:PF04640 |
| ProteinID:ONM03948.1 | SEG:seg | UniParc:UPI000182E1E3 | UniProt:B6TND1 | MapMan:15.5.43 | : |
Description
PLATZ-transcription factor 4PLATZ transcription factor family protein
Coordinates
chr1:+:206932526..206934498
Molecular Weight (calculated)
22613.8 Da
IEP (calculated)
9.046
GRAVY (calculated)
-0.374
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MMPRRVASVP VPDWLEALLA TRFFLACAAH PASPRNECNM FCLDCTGAPP PPPPAFCYYC RAHRHSSHRV IQIRRSSYHD VVRVSEVEDV LDISGVQTYV
101: INSARVLFLN ERPQPRGAGA AAGKAAASPY NCEICGRALL DPFRFCSLGC KLVDTKRSNG HAASSADGGG GGGGAASGND ETTEAGGSKN GPGARPHGRR
201: RKGTPHRAPF WS
101: INSARVLFLN ERPQPRGAGA AAGKAAASPY NCEICGRALL DPFRFCSLGC KLVDTKRSNG HAASSADGGG GGGGAASGND ETTEAGGSKN GPGARPHGRR
201: RKGTPHRAPF WS
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.