Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022058.1-P | Field mustard | nucleus | 99.07 | 93.01 |
| CDX87684 | Canola | nucleus | 90.7 | 82.98 |
| CDX87686 | Canola | nucleus | 87.91 | 81.82 |
| CDY66745 | Canola | nucleus | 81.86 | 78.92 |
| CDY35177 | Canola | nucleus | 66.05 | 62.01 |
| CDY03199 | Canola | nucleus | 63.72 | 60.89 |
| CDY01500 | Canola | nucleus | 60.0 | 60.28 |
| CDX90437 | Canola | nucleus | 60.0 | 60.28 |
| CDY69910 | Canola | nucleus | 63.26 | 60.18 |
| CDY69918 | Canola | nucleus | 62.79 | 59.73 |
| CDY44504 | Canola | nucleus | 62.79 | 59.47 |
| CDX78810 | Canola | nucleus | 62.33 | 59.03 |
| KRH75604 | Soybean | nucleus | 55.81 | 57.14 |
| CDY08880 | Canola | nucleus | 58.6 | 56.25 |
| CDX76551 | Canola | nucleus | 58.6 | 56.25 |
| Solyc08g076860.2.1 | Tomato | nucleus | 57.67 | 54.39 |
| PGSC0003DMT400045164 | Potato | nucleus | 57.21 | 54.19 |
| Solyc08g005100.2.1 | Tomato | cytosol | 56.28 | 54.02 |
| PGSC0003DMT400046007 | Potato | cytosol | 56.28 | 54.02 |
| AT5G46710.1 | Thale cress | nucleus | 56.74 | 53.98 |
| KRH74408 | Soybean | nucleus | 57.67 | 52.54 |
| KRH39550 | Soybean | nucleus | 57.21 | 52.12 |
| PGSC0003DMT400019836 | Potato | nucleus | 53.95 | 52.02 |
| Solyc06g061240.2.1 | Tomato | nucleus | 53.49 | 51.34 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 58.14 | 47.71 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 54.88 | 47.58 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 54.42 | 46.99 |
| KXG30975 | Sorghum | nucleus | 54.88 | 46.83 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 52.09 | 45.53 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 52.09 | 45.53 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 52.09 | 45.53 |
| Os02t0692700-01 | Rice | nucleus | 54.42 | 45.53 |
| Zm00001d051511_P001 | Maize | nucleus | 53.02 | 45.42 |
| Zm00001d017682_P001 | Maize | nucleus | 52.56 | 44.84 |
| Os04t0591100-01 | Rice | nucleus | 51.63 | 44.58 |
| EES12755 | Sorghum | nucleus | 51.16 | 43.82 |
| CDX71409 | Canola | nucleus | 37.67 | 43.09 |
| Zm00001d026047_P002 | Maize | nucleus | 50.23 | 42.69 |
| Zm00001d002489_P001 | Maize | nucleus | 50.7 | 42.58 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 54.42 | 42.55 |
| CDY01340 | Canola | cytosol | 46.05 | 42.49 |
| CDY04518 | Canola | nucleus | 37.21 | 42.33 |
| CDY30518 | Canola | cytosol | 37.21 | 41.88 |
| CDX88300 | Canola | nucleus | 46.05 | 41.77 |
| CDX87583 | Canola | nucleus | 46.05 | 41.6 |
| CDX68093 | Canola | nucleus | 45.58 | 41.0 |
| CDY04591 | Canola | cytosol | 46.51 | 40.98 |
| CDX84082 | Canola | cytosol, endoplasmic reticulum, vacuole | 53.95 | 40.85 |
| CDY33661 | Canola | cytosol | 46.05 | 40.74 |
| CDY00356 | Canola | cytosol | 46.05 | 40.57 |
| CDY29486 | Canola | cytosol | 46.05 | 40.57 |
| CDY44664 | Canola | plasma membrane | 53.95 | 39.46 |
| CDX85958 | Canola | nucleus | 43.72 | 37.6 |
| CDX96610 | Canola | cytosol | 46.05 | 37.5 |
| CDX98234 | Canola | cytosol | 28.37 | 35.47 |
| CDY06424 | Canola | cytosol | 33.49 | 31.58 |
| HORVU6Hr1G067060.3 | Barley | nucleus, plastid | 46.98 | 31.46 |
| CDX81439 | Canola | cytosol | 36.28 | 30.47 |
| CDY01253 | Canola | cytosol, endoplasmic reticulum, golgi, plastid | 51.16 | 30.22 |
| CDY37203 | Canola | cytosol | 35.35 | 29.8 |
| CDX89067 | Canola | cytosol | 33.95 | 29.44 |
| CDY12444 | Canola | nucleus | 32.56 | 29.17 |
| CDY27171 | Canola | nucleus | 32.56 | 29.17 |
| CDY41149 | Canola | cytosol, extracellular, nucleus | 31.16 | 29.13 |
| CDY48369 | Canola | cytosol | 33.49 | 28.92 |
| CDY36264 | Canola | nucleus | 25.58 | 28.65 |
| CDX71792 | Canola | cytosol | 31.63 | 27.98 |
| CDX93111 | Canola | cytosol | 34.88 | 27.08 |
| CDY09414 | Canola | cytosol | 27.44 | 26.82 |
| CDX89603 | Canola | cytosol | 34.42 | 26.71 |
| CDY17645 | Canola | nucleus | 28.84 | 26.61 |
| CDY43172 | Canola | nucleus | 24.19 | 25.87 |
| CDY02353 | Canola | mitochondrion, nucleus | 20.93 | 24.32 |
Protein Annotations
| EnsemblPlants:CDY72135 | EnsemblPlantsGene:GSBRNA2T00025085001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 | PFAM:PF04640 |
| ProteinID:CDY72135 | ProteinID:CDY72135.1 | UniParc:UPI0004EDB213 | UniProt:A0A078K0C7 | MapMan:15.5.43 | : |
Description
BnaAnng40000DBnaAnng40000D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K0C7]
Coordinates
chrLK049150:+:67..1291
Molecular Weight (calculated)
24281.9 Da
IEP (calculated)
7.633
GRAVY (calculated)
-0.557
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: PKSIRSMGVG GPEEEENQWP PWLKPLLKEE HFFVQCDSHG DSPKNKCNMY CLDCTNGSFC PLCLEHHKDH RTIQIRRLSY HNVIRVNEIQ MHLDILSVQT
101: YVIDGAKVVF LNERPQLERV RGVRVTNACD VCSRGLADDC FCFCSLGCKV AGTSRSFEKG GEHTVMESEN SSNISGVENN IPNPQSVNAS TTELPTYTSL
201: RKRPRKGIPY RSPLQ
101: YVIDGAKVVF LNERPQLERV RGVRVTNACD VCSRGLADDC FCFCSLGCKV AGTSRSFEKG GEHTVMESEN SSNISGVENN IPNPQSVNAS TTELPTYTSL
201: RKRPRKGIPY RSPLQ
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.