Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 98.5 | 97.04 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 93.61 | 96.89 |
| Zm00001d030032_P002 | Maize | nucleus | 70.68 | 74.02 |
| Os10t0574700-01 | Rice | nucleus | 69.55 | 72.83 |
| EER91885 | Sorghum | nucleus | 70.3 | 71.92 |
| Zm00001d047025_P001 | Maize | nucleus | 68.05 | 69.35 |
| HORVU1Hr1G050480.5 | Barley | cytosol, nucleus | 72.56 | 61.66 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 53.76 | 55.86 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 51.5 | 55.02 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 49.62 | 53.66 |
| KRH13451 | Soybean | cytosol | 18.8 | 51.02 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 46.99 | 50.0 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 39.85 | 43.8 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 34.96 | 43.26 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 34.21 | 42.33 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 33.08 | 41.71 |
| KRH45433 | Soybean | plastid | 34.59 | 39.32 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 32.33 | 39.27 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 35.71 | 35.71 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 29.32 | 35.62 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 25.94 | 35.38 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 23.31 | 30.54 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 28.2 | 29.53 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 26.32 | 28.81 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 25.56 | 28.69 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G196400.1 | EnsemblPlantsGene:TraesCS1D01G196400 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF13 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:275942167..275944002
Molecular Weight (calculated)
28535.8 Da
IEP (calculated)
8.698
GRAVY (calculated)
-0.460
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHESPFK ELRLKNRRIM GGGAPEPDEE EAEAQVAAAA GEEEQWPQWL RPLLSARFFA QCKTHTESHR SGECNMFCLD CAAGAAAGAA ALCSLCLAHA
101: HRGHHTIQIR RSSYHDVIRV SDIQRFMDIA GVQTYVINSA RVVFLNERPQ QKQPGKAGGG AGGANLCEVC SRSLLDNFRF CSLGCKVAGC SSDGGGNDKA
201: RMMRASRPGR AKGSSDSEAA SSSSPLRNAA RQSFTPSTPP PPPPPAAKRR KGIPHRAPFG NLIIDC
101: HRGHHTIQIR RSSYHDVIRV SDIQRFMDIA GVQTYVINSA RVVFLNERPQ QKQPGKAGGG AGGANLCEVC SRSLLDNFRF CSLGCKVAGC SSDGGGNDKA
201: RMMRASRPGR AKGSSDSEAA SSSSPLRNAA RQSFTPSTPP PPPPPAAKRR KGIPHRAPFG NLIIDC
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.