Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G497600.1 | Wheat | extracellular | 97.67 | 97.67 |
| TraesCS3B01G560400.1 | Wheat | extracellular | 95.81 | 95.81 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 92.56 | 92.56 |
| TraesCS3D01G505000.1 | Wheat | extracellular | 90.23 | 90.23 |
| Os01t0517800-01 | Rice | extracellular | 53.95 | 67.84 |
| EES15787 | Sorghum | endoplasmic reticulum | 63.26 | 63.55 |
| Os01t0518000-01 | Rice | cytosol | 62.33 | 61.75 |
| OQU78879 | Sorghum | endoplasmic reticulum | 60.0 | 60.56 |
| Zm00001d009292_P001 | Maize | extracellular | 59.53 | 59.81 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 52.09 | 52.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.56 | 52.07 |
| KRH19979 | Soybean | cytosol | 49.77 | 51.2 |
| Solyc10g085800.1.1 | Tomato | extracellular | 47.44 | 49.76 |
| PGSC0003DMT400022166 | Potato | extracellular | 47.44 | 49.76 |
| Bra034379.1-P | Field mustard | nucleus | 43.72 | 49.21 |
| CDY30518 | Canola | cytosol | 43.26 | 48.69 |
| CDX71409 | Canola | nucleus | 42.33 | 48.4 |
| KRH32606 | Soybean | extracellular | 49.3 | 47.75 |
| Bra011992.1-P | Field mustard | nucleus | 41.86 | 47.62 |
| CDY04518 | Canola | nucleus | 41.86 | 47.62 |
| KRH25132 | Soybean | cytosol | 47.91 | 46.82 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 47.91 | 46.61 |
| KRG96080 | Soybean | cytosol | 46.98 | 46.12 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 52.09 | 42.11 |
| AT2G27930.5 | Thale cress | plastid | 35.35 | 39.58 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 38.6 | 39.34 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 41.4 | 38.7 |
| KRH30543 | Soybean | nucleus | 32.09 | 38.33 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 42.79 | 38.02 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 41.4 | 36.18 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 41.86 | 36.14 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 36.28 | 35.62 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 43.26 | 34.96 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 33.95 | 33.33 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 28.37 | 31.28 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 34.88 | 30.0 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 32.09 | 29.11 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 26.05 | 27.59 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 31.16 | 27.57 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 32.09 | 27.17 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G505200.1 | EnsemblPlantsGene:TraesCS3D01G505200 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF7 | PFAM:PF04640 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:15.5.43 | : | : | : |
Description
No Description!
Coordinates
chr3D:+:592608060..592609066
Molecular Weight (calculated)
24315.7 Da
IEP (calculated)
7.799
GRAVY (calculated)
-0.463
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGMVPTWL ELLLATQFFA ICTNHLSSTR NECNLFCIDC EESKGAFCYY CRSRHHSTHR VIQIRRSSYH DVVRVAELKD ILDISDVQTY VINSATVVFL
101: NERPQHRGCG VSAIKASSSS YNCEICNRAL LDPFRFCSLG CNLKGIKEDM RTTVPIGDII DYTRKDDDTD SSNTSGNSGN NEESCSDADY CKDNPSPPRV
201: IRHRRKGIPR RAPFF
101: NERPQHRGCG VSAIKASSSS YNCEICNRAL LDPFRFCSLG CNLKGIKEDM RTTVPIGDII DYTRKDDDTD SSNTSGNSGN NEESCSDADY CKDNPSPPRV
201: IRHRRKGIPR RAPFF
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.