Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G561000.1 | Wheat | extracellular | 94.42 | 94.42 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 94.42 | 93.98 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 93.49 | 93.49 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 90.23 | 90.23 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 73.95 | 69.43 |
| Os01t0517800-01 | Rice | extracellular | 52.56 | 66.08 |
| EES15787 | Sorghum | endoplasmic reticulum | 62.79 | 63.08 |
| OQU78879 | Sorghum | endoplasmic reticulum | 60.47 | 61.03 |
| Zm00001d009292_P001 | Maize | extracellular | 59.53 | 59.81 |
| Os01t0518000-01 | Rice | cytosol | 59.53 | 58.99 |
| GSMUA_AchrUn_... | Banana | cytosol | 52.09 | 51.61 |
| KRH19979 | Soybean | cytosol | 48.84 | 50.24 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 50.23 | 50.23 |
| Solyc10g085800.1.1 | Tomato | extracellular | 46.98 | 49.27 |
| PGSC0003DMT400022166 | Potato | extracellular | 46.98 | 49.27 |
| Bra034379.1-P | Field mustard | nucleus | 43.26 | 48.69 |
| CDY30518 | Canola | cytosol | 42.79 | 48.17 |
| CDX71409 | Canola | nucleus | 41.4 | 47.34 |
| KRH25132 | Soybean | cytosol | 48.37 | 47.27 |
| Bra011992.1-P | Field mustard | nucleus | 41.4 | 47.09 |
| CDY04518 | Canola | nucleus | 41.4 | 47.09 |
| KRH32606 | Soybean | extracellular | 48.37 | 46.85 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 46.98 | 45.7 |
| KRG96080 | Soybean | cytosol | 46.51 | 45.66 |
| TraesCS7D01G279600.1 | Wheat | cytosol | 51.16 | 41.35 |
| TraesCS6D01G157400.1 | Wheat | cytosol, mitochondrion | 40.47 | 41.23 |
| AT2G27930.5 | Thale cress | plastid | 34.42 | 38.54 |
| KRH30543 | Soybean | nucleus | 32.09 | 38.33 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 40.93 | 38.26 |
| TraesCS6D01G157500.1 | Wheat | cytosol | 38.14 | 37.44 |
| TraesCS7D01G390300.1 | Wheat | cytosol | 41.4 | 36.78 |
| TraesCS2D01G447400.1 | Wheat | cytosol | 41.4 | 36.18 |
| TraesCS6D01G250500.1 | Wheat | nucleus | 41.86 | 36.14 |
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 42.33 | 34.21 |
| TraesCS2D01G496600.1 | Wheat | mitochondrion | 33.95 | 33.33 |
| TraesCS2D01G496700.1 | Wheat | extracellular | 27.91 | 30.77 |
| TraesCS1D01G069600.1 | Wheat | cytosol, nucleus, plastid | 34.42 | 29.6 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 32.56 | 29.54 |
| TraesCS6D01G230300.1 | Wheat | cytosol | 26.05 | 27.59 |
| TraesCS6D01G146600.1 | Wheat | cytosol | 30.7 | 27.16 |
| TraesCS7D01G466400.1 | Wheat | nucleus | 31.16 | 26.38 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G505000.1 | EnsemblPlantsGene:TraesCS3D01G505000 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF7 | PFAM:PF04640 |
| SignalP:SignalP-noTM | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:+:592575963..592577383
Molecular Weight (calculated)
24308.6 Da
IEP (calculated)
7.254
GRAVY (calculated)
-0.496
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGTVPTWL ELLLATQFFA ICTNHLFSNR NECNLFCIDC EESKGAFCYY CCSDHHSTHR VIQIRRSSYH DVVRVAELKD VLDISDVQTY VINSATVVFL
101: NERPQQRGCG VSAVKASSSS YNCESCNRAL LDPFRFCSLG CNLKGIKEDM RTSIPTRDFI DCTRKDDDTD CSNTSGNTGN NEESCSDADY CKEKPSPPRV
201: IRHRRKGIPQ RAPFY
101: NERPQQRGCG VSAVKASSSS YNCESCNRAL LDPFRFCSLG CNLKGIKEDM RTSIPTRDFI DCTRKDDDTD CSNTSGNTGN NEESCSDADY CKEKPSPPRV
201: IRHRRKGIPQ RAPFY
001: MIRTEEEEDY TSPPWLMPML RGSYFVPCSI HVDSNKNECN LFCLDCAGNA FCSYCLVKHK DHRVVQIRRS SYHNVVRVNE IQKFIDIACV QTYIINSAKI
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
101: VFLNERPQPR IGKGVTNTCE ICCRSLLDSF RFCSLGCKLG GMRRGDLSLT FSLKGKHGRE YLGGSESDEA TTPTKMRKTN AFNRLMSGLS ISTVRFDDYG
201: PNGDQRSSSS GDEGGFSFSP GTPPIYNHRN SSRRKGVPHR APF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.