Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G505000.1 | Wheat | extracellular | 69.43 | 73.95 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 67.69 | 72.09 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 67.25 | 71.3 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 66.81 | 71.16 |
| TraesCS3A01G497600.1 | Wheat | extracellular | 63.32 | 67.44 |
| EES15787 | Sorghum | endoplasmic reticulum | 43.67 | 46.73 |
| Os01t0518000-01 | Rice | cytosol | 43.23 | 45.62 |
| OQU78879 | Sorghum | endoplasmic reticulum | 41.92 | 45.07 |
| Os01t0517800-01 | Rice | extracellular | 32.75 | 43.86 |
| Zm00001d009292_P001 | Maize | extracellular | 39.3 | 42.06 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.24 | 38.25 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 35.37 | 37.85 |
| Bra034379.1-P | Field mustard | nucleus | 31.44 | 37.7 |
| CDY30518 | Canola | cytosol | 31.0 | 37.17 |
| Solyc10g085800.1.1 | Tomato | extracellular | 33.19 | 37.07 |
| PGSC0003DMT400022166 | Potato | extracellular | 33.19 | 37.07 |
| AT2G27930.5 | Thale cress | plastid | 31.0 | 36.98 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 34.5 | 36.74 |
| KRH19979 | Soybean | cytosol | 33.19 | 36.36 |
| CDX71409 | Canola | nucleus | 29.69 | 36.17 |
| Bra011992.1-P | Field mustard | nucleus | 29.69 | 35.98 |
| CDY04518 | Canola | nucleus | 29.69 | 35.98 |
| KRH25132 | Soybean | cytosol | 33.62 | 35.0 |
| KRH32606 | Soybean | extracellular | 33.19 | 34.23 |
| TraesCS2A01G496400.1 | Wheat | mitochondrion | 24.02 | 34.16 |
| KRG96080 | Soybean | cytosol | 31.88 | 33.33 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 32.75 | 32.61 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 31.44 | 32.58 |
| TraesCS2A01G496500.1 | Wheat | nucleus | 21.83 | 31.65 |
| TraesCS6A01G168400.1 | Wheat | cytosol | 28.82 | 30.7 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 29.69 | 28.1 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 29.69 | 27.64 |
| TraesCS2A01G496300.1 | Wheat | mitochondrion | 25.33 | 26.73 |
| TraesCS1A01G192800.1 | Wheat | cytosol, mitochondrion, nucleus | 31.0 | 26.3 |
| KRH30543 | Soybean | nucleus | 20.52 | 26.11 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 31.0 | 25.82 |
| TraesCS1A01G068200.1 | Wheat | nucleus | 25.76 | 23.89 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 23.58 | 22.78 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 21.83 | 20.58 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 21.4 | 19.22 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 15.72 | 17.73 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G497900.1 | EnsemblPlantsGene:TraesCS3A01G497900 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF7 | PFAM:PF04640 |
| MapMan:15.5.43 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:724022278..724026233
Molecular Weight (calculated)
25894.8 Da
IEP (calculated)
8.255
GRAVY (calculated)
-0.448
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MFTLFTSNPH AKSQKEILSR GVSVEAYITK KIAIALQDLV SKEATIQAPF HSCSDTMQCI FHYQPLIVVT LMQMFDKIRR SSYHDVVRVA ELKDVLDIND
101: VQTYVINSAT VVFLNERPQQ RGCGVSAVKA SSSSYNCESC NRALLDPFRF CSLGCNLKGI KEDMRTNIPT RDFIDYTRKD DDTDCSNTSG NTGNNEESCS
201: DANYCKEKPS PPRVIRHRRK GIPQRAPFY
101: VQTYVINSAT VVFLNERPQQ RGCGVSAVKA SSSSYNCESC NRALLDPFRF CSLGCNLKGI KEDMRTNIPT RDFIDYTRKD DDTDCSNTSG NTGNNEESCS
201: DANYCKEKPS PPRVIRHRRK GIPQRAPFY
001: MSATCSVSPV KTLRFASTAA PPFTLIIPSF RSFIFSTHNA YTYIYISLLT QSNSLSLTLR QIRRSSYHDV VRVSEIENAL DIRGVQTYVI NSARVLFLNE
101: RPQPKNSSHG AASSTPKTMS YFCETCCRTL LDPFRFCSLG CKVEGMRKNK EEEEERLRKE RQQETHKGTH PPTHTSNSRR RKGIPHRAPF AS
101: RPQPKNSSHG AASSTPKTMS YFCETCCRTL LDPFRFCSLG CKVEGMRKNK EEEEERLRKE RQQETHKGTH PPTHTSNSRR RKGIPHRAPF AS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.