Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G196400.1 | Wheat | cytosol, mitochondrion, nucleus | 97.04 | 98.5 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 92.22 | 96.89 |
| Zm00001d030032_P002 | Maize | nucleus | 70.37 | 74.8 |
| Os10t0574700-01 | Rice | nucleus | 68.89 | 73.23 |
| EER91885 | Sorghum | nucleus | 70.37 | 73.08 |
| Zm00001d047025_P001 | Maize | nucleus | 67.78 | 70.11 |
| HORVU1Hr1G050480.5 | Barley | cytosol, nucleus | 72.22 | 62.3 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 52.59 | 55.47 |
| TraesCS2A01G448300.1 | Wheat | cytosol | 48.52 | 53.25 |
| KRH13451 | Soybean | cytosol | 18.52 | 51.02 |
| TraesCS6A01G264400.2 | Wheat | nucleus | 51.48 | 50.55 |
| TraesCS1A01G068200.1 | Wheat | nucleus | 45.56 | 49.8 |
| TraesCS7A01G281000.1 | Wheat | cytosol | 35.19 | 44.39 |
| TraesCS7A01G394800.1 | Wheat | cytosol | 39.26 | 43.8 |
| TraesCS3A01G497600.1 | Wheat | extracellular | 34.07 | 42.79 |
| TraesCS6A01G168400.1 | Wheat | cytosol | 32.59 | 40.93 |
| KRH45433 | Soybean | plastid | 34.44 | 39.74 |
| TraesCS2A01G496400.1 | Wheat | mitochondrion | 21.85 | 36.65 |
| TraesCS2A01G496300.1 | Wheat | mitochondrion | 28.15 | 35.02 |
| TraesCS2A01G496500.1 | Wheat | nucleus | 20.0 | 34.18 |
| TraesCS3A01G497900.1 | Wheat | cytosol | 26.3 | 31.0 |
| TraesCS6A01G248200.1 | Wheat | cytosol | 22.96 | 30.54 |
| TraesCS7A01G479100.1 | Wheat | nucleus | 27.41 | 29.02 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 25.19 | 28.69 |
| TraesCS6A01G156600.1 | Wheat | cytosol | 24.81 | 27.57 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G192800.1 | EnsemblPlantsGene:TraesCS1A01G192800 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF13 | PFAM:PF04640 |
| SEG:seg | MapMan:15.5.43 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:-:348398667..348400619
Molecular Weight (calculated)
28968.3 Da
IEP (calculated)
8.779
GRAVY (calculated)
-0.489
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIDHESPFK ELRLKNRRIM GGGAPEPDEE EAEAQVAAPA AAGEEEQWPQ WLRPLLSARF FAQCKTHTES HRSGECNMFC LDCAAGAAAG AAALCSLCLA
101: HAHRGHHTIQ IRRSSYHDVI RVSDIQRFMD IAGVQTYVIN SARVVFLNER PQQKQPGKAG GGGAGSANLC EVCSRSLLDN FRFCSLGCKV TGCSSDGGGN
201: DKARTMMRAS RPGRAKGSSD SEAASSSSPL RNAGRQSFTP STPPPPPPPA AKRRKGIPHR APFGNLIIDY
101: HAHRGHHTIQ IRRSSYHDVI RVSDIQRFMD IAGVQTYVIN SARVVFLNER PQQKQPGKAG GGGAGSANLC EVCSRSLLDN FRFCSLGCKV TGCSSDGGGN
201: DKARTMMRAS RPGRAKGSSD SEAASSSSPL RNAGRQSFTP STPPPPPPPA AKRRKGIPHR APFGNLIIDY
001: MGAEEETNKT YPHWLKPLLR EKFFVQCKLH ADSHKSECNM YCLDCTNGPL CSLCLSFHKD HHAIQIRRSS YHDVIRVSEI QKFLDITGVQ TYVINSAKVV
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
101: FLNERPQPRP GKGVINTCEV CYRSLVDSFR FCSLGCKISG ISKKKRKEWT NNLSDSDDSY SSTSIGRLKK NDDIMNNSFT PSTPPLSAVN RRIAKRRKGI
201: PHRAPFGGLI IEY
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:F4IEB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.