Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G497600.1 | Wheat | extracellular | 96.28 | 96.28 |
| TraesCS3D01G505200.1 | Wheat | extracellular | 95.81 | 95.81 |
| HORVU3Hr1G110200.1 | Barley | extracellular | 89.3 | 89.3 |
| TraesCS3B01G561000.1 | Wheat | extracellular | 88.37 | 88.37 |
| TraesCS3B01G560600.1 | Wheat | extracellular | 87.91 | 87.5 |
| Os01t0517800-01 | Rice | extracellular | 53.49 | 67.25 |
| EES15787 | Sorghum | endoplasmic reticulum | 62.79 | 63.08 |
| Os01t0518000-01 | Rice | cytosol | 61.4 | 60.83 |
| OQU78879 | Sorghum | endoplasmic reticulum | 59.53 | 60.09 |
| Zm00001d009292_P001 | Maize | extracellular | 59.07 | 59.35 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 50.7 | 50.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 51.16 | 50.69 |
| KRH19979 | Soybean | cytosol | 48.84 | 50.24 |
| PGSC0003DMT400022166 | Potato | extracellular | 46.98 | 49.27 |
| Solyc10g085800.1.1 | Tomato | extracellular | 46.98 | 49.27 |
| Bra034379.1-P | Field mustard | nucleus | 43.26 | 48.69 |
| CDY30518 | Canola | cytosol | 42.79 | 48.17 |
| CDX71409 | Canola | nucleus | 41.86 | 47.87 |
| KRH25132 | Soybean | cytosol | 48.37 | 47.27 |
| CDY04518 | Canola | nucleus | 41.4 | 47.09 |
| Bra011992.1-P | Field mustard | nucleus | 41.4 | 47.09 |
| KRH32606 | Soybean | extracellular | 48.37 | 46.85 |
| KRG96080 | Soybean | cytosol | 46.98 | 46.12 |
| KRH67792 | Soybean | cytosol, nucleus, plasma membrane | 46.98 | 45.7 |
| TraesCS7B01G180100.1 | Wheat | cytosol | 52.09 | 41.95 |
| TraesCS6B01G196100.1 | Wheat | cytosol, mitochondrion | 39.07 | 39.81 |
| KRH30543 | Soybean | nucleus | 32.56 | 38.89 |
| AT2G27930.5 | Thale cress | plastid | 34.42 | 38.54 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 40.93 | 38.26 |
| TraesCS7B01G296800.1 | Wheat | cytosol | 42.33 | 37.6 |
| TraesCS2B01G524600.1 | Wheat | mitochondrion | 27.91 | 37.27 |
| TraesCS6B01G291400.1 | Wheat | nucleus | 41.86 | 36.29 |
| TraesCS2B01G469000.1 | Wheat | cytosol | 41.4 | 36.18 |
| TraesCS1B01G207700.1 | Wheat | cytosol, mitochondrion, nucleus | 41.86 | 35.02 |
| TraesCS1B01G086700.1 | Wheat | cytosol, nucleus, plastid | 35.35 | 29.57 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 32.56 | 29.54 |
| TraesCS6B01G276500.1 | Wheat | cytosol | 25.58 | 27.78 |
| TraesCS7B01G381500.1 | Wheat | nucleus | 32.09 | 26.95 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G560400.1 | EnsemblPlantsGene:TraesCS3B01G560400 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF7 | PFAM:PF04640 |
| SEG:seg | SignalP:SignalP-noTM | MapMan:15.5.43 | : | : | : |
Description
No Description!
Coordinates
chr3B:-:794543346..794544515
Molecular Weight (calculated)
24256.6 Da
IEP (calculated)
7.605
GRAVY (calculated)
-0.414
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGGMVPTWL ELLLATQFFT ICTNHLSSTR NECNLFCIDC EESKGAFCYY CRSRHHSTHR VIQIRRSSYH DVVRVAELKD ILDISDVQTY VINSATVVFL
101: NERPQHRGCG VSAIKASLSS YNCEICNRAL LDPFRFCSLG CNLKGIKEDM RTSVPIGDII DYTRKDDDTD SSNTSGNTGN NVESCSDADY CKDNPSSPRA
201: IHHRRKGIPQ RAPFF
101: NERPQHRGCG VSAIKASLSS YNCEICNRAL LDPFRFCSLG CNLKGIKEDM RTSVPIGDII DYTRKDDDTD SSNTSGNTGN NVESCSDADY CKDNPSSPRA
201: IHHRRKGIPQ RAPFF
001: MEEPKWLEGL LRTNFFSICP RHRETPRNEC NMFCLSCQNA AFCFYCRSSF HIDHPVLQIR RSSYHDVVRV SEIENALDIR GVQTYVINSA RVLFLNERPQ
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
101: PKNSSHGAAS STPKTMSYFC ETCCRTLLDP FRFCSLGCKV EGMRKNKEEE EERLRKERQQ ETHKGTHPPT HTSNSRRRKG IPHRAPFAS
Arabidopsis Description
PLATZ transcription factor family protein [Source:TAIR;Acc:AT2G27930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.