Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P18120_001 | Banana | nucleus | 75.93 | 76.25 |
| GSMUA_Achr8P14740_001 | Banana | cytosol | 70.95 | 74.35 |
| GSMUA_Achr5P03420_001 | Banana | cytosol | 71.37 | 72.27 |
| GSMUA_Achr5P13970_001 | Banana | nucleus | 71.37 | 71.07 |
| GSMUA_Achr4P27280_001 | Banana | nucleus | 72.61 | 70.28 |
| GSMUA_Achr4P19110_001 | Banana | nucleus | 69.71 | 65.62 |
| GSMUA_Achr2P18160_001 | Banana | plasma membrane | 68.05 | 64.82 |
| KRH13451 | Soybean | cytosol | 21.99 | 54.08 |
| GSMUA_Achr6P36360_001 | Banana | cytosol | 44.81 | 53.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.57 | 51.98 |
| GSMUA_Achr7P20650_001 | Banana | cytosol | 39.42 | 51.63 |
| GSMUA_Achr9P12280_001 | Banana | cytosol | 44.81 | 47.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.74 | 47.47 |
| KRH45433 | Soybean | plastid | 45.64 | 47.01 |
| GSMUA_Achr7P04460_001 | Banana | extracellular | 41.08 | 46.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.2 | 37.38 |
| GSMUA_Achr7P03600_001 | Banana | nucleus | 31.95 | 34.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.29 | 32.74 |
| GSMUA_Achr11P... | Banana | cytosol | 31.12 | 32.19 |
| GSMUA_Achr2P02580_001 | Banana | nucleus | 28.22 | 32.08 |
| GSMUA_Achr8P33510_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 31.95 | 31.69 |
| GSMUA_Achr9P30790_001 | Banana | nucleus | 29.46 | 31.14 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 30.71 | 29.6 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 29.46 | 28.63 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 31.54 | 26.67 |
| GSMUA_Achr6P20140_001 | Banana | extracellular | 20.75 | 26.18 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 29.46 | 25.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P17810_001 | EnsemblPlants:GSMUA_Achr11T17810_001 | EnsemblPlantsGene:GSMUA_Achr11G17810_001 | InterPro:DUF597 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF8 |
| PFAM:PF04640 | SEG:seg | UniParc:UPI000295B6D1 | UniProt:M0RT61 | MapMan:15.5.43 | : |
Description
Putative Uncharacterized protein At3g50808 [Source:GMGC_GENE;Acc:GSMUA_Achr11G17810_001]
Coordinates
chr11:-:19382671..19384092
Molecular Weight (calculated)
26761.9 Da
IEP (calculated)
9.466
GRAVY (calculated)
-0.563
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIDQESPNK ELDLKNRRVC CRFSLGGGGG LEDDSRCPRW LRPLLSTRFF IQCNLHADSN KTECNRYCLD CTNGALCSLC LAHHHGHRTT QIRRSSYHDV
101: IRVSEIQKVL DITGVQTYII NSARVVFLNE RPQLRPGKGV TNTCEVCERS LLDSFRFCSL GCKRAGTAND HSKKKSMKQK AMAAAAPSDS EESYASSRGS
201: EKSNVSQGFT PSTPPPAGTR SAKRRKGIPH RAPFGSLLLE F
101: IRVSEIQKVL DITGVQTYII NSARVVFLNE RPQLRPGKGV TNTCEVCERS LLDSFRFCSL GCKRAGTAND HSKKKSMKQK AMAAAAPSDS EESYASSRGS
201: EKSNVSQGFT PSTPPPAGTR SAKRRKGIPH RAPFGSLLLE F
001: MGPMIRTEEE EDYTSPPWLM PMLRGSYFVP CSIHVDSNKN ECNLFCLDCA GNAFCSYCLV KHKDHRVVQI RRSSYHNVVR VNEIQKFIDI ACVQTYIINS
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
101: AKIVFLNERP QPRIGKGVTN TCEICCRSLL DSFRFCSLGC KLGGMRRGDL SLTFSLKGKH GREYLGGSES DEATTPTKMR KTNAFNRLMS GLSISTVRFD
201: DYGPNGDQRS SSSGDEGGFS FSPGTPPIYN HRNSSRRKGV PHRAPF
Arabidopsis Description
At1g21000/F9H16_1 [Source:UniProtKB/TrEMBL;Acc:Q93V70]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.