Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20236 | Soybean | nucleus | 84.9 | 84.21 |
| KRH03576 | Soybean | nucleus | 84.9 | 83.87 |
| KRH12861 | Soybean | nucleus | 81.63 | 83.68 |
| KRH37851 | Soybean | nucleus | 81.22 | 83.26 |
| Solyc12g010470.1.1 | Tomato | cytosol | 76.33 | 76.02 |
| PGSC0003DMT400020401 | Potato | cytosol | 75.92 | 75.61 |
| Solyc07g007320.1.1 | Tomato | cytosol | 78.37 | 75.29 |
| Zm00001d015560_P001 | Maize | nucleus | 70.61 | 73.0 |
| Os02t0183000-00 | Rice | cytosol, extracellular, nucleus | 70.61 | 73.0 |
| KXG29636 | Sorghum | nucleus | 70.61 | 73.0 |
| HORVU6Hr1G028520.1 | Barley | cytosol, extracellular, nucleus | 68.98 | 71.31 |
| TraesCS6D01G134200.1 | Wheat | nucleus | 68.98 | 71.31 |
| TraesCS6B01G173400.1 | Wheat | nucleus | 68.98 | 71.31 |
| TraesCS6A01G145200.1 | Wheat | nucleus | 68.98 | 71.31 |
| AT2G12646.1 | Thale cress | nucleus | 68.98 | 66.02 |
| VIT_00s0233g00100.t01 | Wine grape | cytosol | 35.51 | 63.97 |
| GSMUA_Achr9P22490_001 | Banana | mitochondrion | 63.67 | 62.9 |
| GSMUA_Achr6P30690_001 | Banana | nucleus | 63.27 | 62.0 |
| CDY37203 | Canola | cytosol | 64.49 | 61.96 |
| Bra037203.1-P | Field mustard | cytosol | 64.49 | 61.96 |
| CDX81439 | Canola | cytosol | 64.49 | 61.72 |
| GSMUA_Achr1P09990_001 | Banana | nucleus, plastid | 70.61 | 60.92 |
| GSMUA_Achr6P35220_001 | Banana | nucleus | 69.39 | 59.65 |
| Bra013149.1-P | Field mustard | cytosol | 67.35 | 59.57 |
| CDX93111 | Canola | cytosol | 67.35 | 59.57 |
| CDX89603 | Canola | cytosol | 66.94 | 59.21 |
| VIT_15s0048g00580.t01 | Wine grape | nucleus | 54.69 | 53.6 |
| VIT_02s0154g00150.t01 | Wine grape | nucleus | 48.98 | 49.18 |
| VIT_03s0063g02240.t01 | Wine grape | extracellular | 43.67 | 44.4 |
| VIT_01s0011g01410.t01 | Wine grape | nucleus | 45.71 | 42.91 |
| VIT_06s0061g00880.t01 | Wine grape | cytosol | 19.18 | 35.34 |
| VIT_16s0039g01560.t01 | Wine grape | nucleus | 30.61 | 32.47 |
| VIT_02s0012g01400.t01 | Wine grape | nucleus | 31.02 | 29.01 |
| VIT_08s0007g04560.t01 | Wine grape | cytosol | 26.94 | 28.7 |
| VIT_01s0011g06060.t01 | Wine grape | nucleus | 28.16 | 28.05 |
| VIT_18s0122g00320.t01 | Wine grape | cytosol | 29.39 | 21.88 |
Protein Annotations
| EntrezGene:100244833 | wikigene:100244833 | MapMan:15.5.43 | EMBL:AM488996 | ProteinID:CAN77779 | ProteinID:CAN77779.1 |
| ProteinID:CBI25577 | ProteinID:CBI25577.3 | UniProt:D7T4Z5 | InterPro:DUF597 | EMBL:FN595515 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008168 | GO:GO:0016740 | GO:GO:0032259 |
| EntrezGene:LOC100244833 | wikigene:LOC100244833 | PFAM:PF04640 | PANTHER:PTHR31065 | PANTHER:PTHR31065:SF11 | UniParc:UPI00015CCB22 |
| ArrayExpress:VIT_11s0118g00600 | EnsemblPlantsGene:VIT_11s0118g00600 | EnsemblPlants:VIT_11s0118g00600.t01 | unigene:Vvi.20625 | RefSeq:XP_002268309 | RefSeq:XP_002268309.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr11:-:6377573..6378826
Molecular Weight (calculated)
27937.7 Da
IEP (calculated)
8.138
GRAVY (calculated)
-0.420
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MIMGIQKPAW LEALYTQKFF VSCSIHETAK KNEKNILCLD CCTSICPHCL QFHRFHRLVQ VRRYVYHDVV RLEDLEKLID CSNVQAYTIN SAKVVFIKKR
101: PQNRQFKGSG NYCTSCDRSL QEPYIHCSLG CKVDFLLKHN KDLSPYLRTC HSLQLSPDFL VPPDMGEDEM TNETPHSTIV DCDEPMSSSS GSSGSENMSM
201: MCTEIVRKKR SGLYVCGRSA SKVSEEDMAT SMSRRKGIPH RSPMC
101: PQNRQFKGSG NYCTSCDRSL QEPYIHCSLG CKVDFLLKHN KDLSPYLRTC HSLQLSPDFL VPPDMGEDEM TNETPHSTIV DCDEPMSSSS GSSGSENMSM
201: MCTEIVRKKR SGLYVCGRSA SKVSEEDMAT SMSRRKGIPH RSPMC
001: MGIQKPAWLD ALYAEKFFVG CPYHETAKKN ERNVCCLDCC TSLCPHCVPS HRFHRLLQVR RYVYHDVVRL EDLQKLIDCS NVQAYTINSA KVVFIKKRPQ
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
101: NRQFKGAGNY CTSCDRSLQE PYIHCSLGCK VDFVMKRYRD ITPFLKPCHT LTLGPDYIIP QDLLTDDEVA AYETPRSTVV DGDESMSWSS ASSDNNNAGA
201: AAAYAATTTH VVRKKRTGFC LCAKSANSYK EVSEDPDDIS ACINRRKGVP QRSPLC
Arabidopsis Description
PLATZ transcription factor family protein [Source:UniProtKB/TrEMBL;Acc:Q1G3Q4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.