Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G209100.1 | Wheat | nucleus | 97.86 | 97.71 |
| TraesCS2B01G235100.1 | Wheat | golgi | 96.74 | 96.64 |
| HORVU2Hr1G041760.1 | Barley | nucleus | 91.03 | 93.42 |
| HORVU2Hr1G041770.2 | Barley | nucleus | 90.39 | 90.53 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 21.46 | 61.09 |
| GSMUA_Achr11P... | Banana | cytosol | 10.09 | 57.1 |
| CDX89056 | Canola | cytosol | 17.51 | 55.88 |
| KXG36457 | Sorghum | cytosol | 44.53 | 45.55 |
| Zm00001d021741_P001 | Maize | nucleus | 43.03 | 44.26 |
| Zm00001d006573_P002 | Maize | cytosol | 43.03 | 43.92 |
| GSMUA_Achr11P... | Banana | nucleus | 37.0 | 43.12 |
| PGSC0003DMT400004663 | Potato | nucleus | 19.06 | 43.12 |
| GSMUA_Achr11P... | Banana | nucleus | 37.8 | 42.75 |
| KRH48862 | Soybean | nucleus | 37.21 | 41.64 |
| KRH66436 | Soybean | endoplasmic reticulum | 37.0 | 41.55 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 37.8 | 41.36 |
| KRH46542 | Soybean | nucleus | 38.76 | 39.52 |
| Solyc01g088700.2.1 | Tomato | nucleus | 37.8 | 39.22 |
| PGSC0003DMT400004341 | Potato | nucleus | 37.75 | 39.13 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 40.42 | 38.94 |
| KRH75579 | Soybean | endoplasmic reticulum | 37.8 | 38.86 |
| CDY42674 | Canola | plastid | 32.57 | 38.41 |
| Bra014505.1-P | Field mustard | cytosol | 32.78 | 37.08 |
| AT3G60240.4 | Thale cress | cytosol | 33.32 | 36.13 |
| Solyc08g077700.2.1 | Tomato | nucleus | 27.18 | 30.89 |
| TraesCS2D01G388100.1 | Wheat | nucleus | 28.67 | 30.15 |
| CDX98293 | Canola | cytosol | 11.32 | 29.69 |
| Os07t0555200-01 | Rice | nucleus, plastid | 17.99 | 26.0 |
| TraesCS2D01G353600.1 | Wheat | cytosol, golgi, nucleus | 9.82 | 23.35 |
Protein Annotations
| Gene3D:1.25.40.180 | MapMan:17.4.2.3.2 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003891 | InterPro:IPR016021 | InterPro:Initiation_fac_eIF4g_MI |
| InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 | PFAM:PF02847 | PFAM:PF02854 | PFscan:PS51366 | PANTHER:PTHR23253 |
| PANTHER:PTHR23253:SF9 | SMART:SM00543 | SMART:SM00544 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2D01G215300 | EnsemblPlants:TraesCS2D01G215300.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:177857639..177864866
Molecular Weight (calculated)
203299.0 Da
IEP (calculated)
7.651
GRAVY (calculated)
-0.800
Length
1873 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSQRGDRGEG HARRPGGRSN SFGGHRGGGV GGAGKGAGGP SGGQPPLSSN RSFRKPGNGH GGHQRVVNQP DTTGFQPAPA PGPLQTPPRP PAPQNAPVHV
0101: PVSAPRPQHH DSPGLQAPSM SPASENPTYI PLPKNIPRAG PKAPPKSSNA PAPQGAPKGE SSKGFNLQFG SINMNMNGLP QFPARTSSAP PNLDEQKRNQ
0201: VLSDGPKVAP SMPVPPALKQ PHPTPQQQQQ HPPPQQLLQQ QHHPLPQQQH HPQPPQQQQQ PPPQQQPLPQ QQQTRKDALG PSQPNTLNTH VPSQVKRDVH
0301: VSPSIQNFAP QRPSVQPLPG MGMPMHFHHQ QQTVPLQFGG HNQGVVPSSM QMPIGLPGGN ASQVQQQMYV QNMQQQLHQQ MMHQGQTMMY PSVAHTIPPQ
0401: LGNVNLNMAT QYPQQQQNKL VAPRKSSNIK ITDPNTNKEV VLGRPSPNVA AQPQQVSGVA TQPMVYYTNP QQTSYSQSGT YYSGTAGVVP TGSQGRFSYP
0501: ATQAGQSIPF MNPSMSNTVP ASHKDNIAGP ATSGQSQLIG KPQGGLHMEK PVPSVKISMP AGRSDASKFR VADHAVQHRQ KDSEVISGAM VSNKPVIEKE
0601: SKAPSIPEKH SKESTAPSTV EKHPTTVTQP LPIEAAKPET DAATYSGANS PSFLTGADEK KESLPITDSL KDNKKNATRN DTKNLPQQPQ PASPAEELKG
0701: QTSVKVGDDV VGHMETKSFD SEQVDLTSKG SGLTSATSES SISPILGKSE ADSTSVNAAD VPAMVISSAK LSSASTGEPQ AVESLGVAAV KSKEIEITHQ
0801: ISPESGDVKI MSDSTENESH DCMVDLAEQA SLATSKPGNS DATSFVTDPQ ELPKECTTSV PEEHSLMNTS HNKDTETLSA SVDANDVSEA NSGTSSESTS
0901: QIANDKDIRS SIQETGLAVS GITPGMLPVN HSVASEGQVK HADGAKDESS TEQSSAAPTG SVRPLSREKP TAELTRTKSA AGRKKKRKEM LSKADAAGTS
1001: DLYNAYKGPQ EQSDSVATSE GADSSSTVDG THVLPEESER EAMCEDDGKK KVEPDDWEDA ADMSTPKLQS SDSGNQASAV QLPDSDMTEA NGRKKYSRDF
1101: LLTFAHQYSS LPVGIRMDTV TSTLFKDLAG KSYVIDREPH PSSARGSDRP TSRGDRRGPA MDDDKWLKSG VPYSPNRDAH MDLTNGPAMN YRGGPGATHG
1201: VLRNPRAALL VGPQSNAPQV PRSGSDADRW QQKGLIPSPV TPMQVMHKAE KKYVVGKVSD EEQAKQRQLK AILNKLTPQN FDKLFEQVKE VNIDNVSTLT
1301: GVISQIFDKA LMEPTFCEMY ANFCSHLAGA LPDFSEDNEK ITFKRLLLNK CQEEFERGER EEAEADKTEE EGEIKQTKEE REEKRVKARR RMLGNIRLIG
1401: ELYKKRMLTE RIMHECIKKL LGNYQNPDEE NIEALCKLMS TIGEMIDHPK AKEHMDAYFD RMRNLSTSQL ISSRVRFLLR DSIDLRKNKW QQRRKVDGPK
1501: KIDEVHRDAA QERHAQSQSS RSRGPVVSSL PRRGAPSMDY GSRGSAAPLV SPGPQQRGRG FGNQDIRYEQ ERHQFDRTVP LPQRSVKDEA ITLGPQGGLA
1601: RGMSLRGQPP VSNSELPSVV DQRRIVSGPN GYNSVPSTTR EDTSSRIPDR FSGRIAPAAQ SASSSHRPAS QEGRSGNKSY SEEELREKSI ATIREYYSAK
1701: DEKEVALCIE ELNAPSFYPS LVSLWVNDSF ERKDMERELL AKLFVGLYNG GYNLLSKPQL IEGLSSVLAS LEDALSDSPR AAEYLGRLLA RFVVEKILVL
1801: QDVGKLIEEG GEEPGHLVQE GIAADVLGAV LEWIKTEKGD SFLKEAKTSS NLKLEDFRPQ HLKRSKLDAF MLT
0101: PVSAPRPQHH DSPGLQAPSM SPASENPTYI PLPKNIPRAG PKAPPKSSNA PAPQGAPKGE SSKGFNLQFG SINMNMNGLP QFPARTSSAP PNLDEQKRNQ
0201: VLSDGPKVAP SMPVPPALKQ PHPTPQQQQQ HPPPQQLLQQ QHHPLPQQQH HPQPPQQQQQ PPPQQQPLPQ QQQTRKDALG PSQPNTLNTH VPSQVKRDVH
0301: VSPSIQNFAP QRPSVQPLPG MGMPMHFHHQ QQTVPLQFGG HNQGVVPSSM QMPIGLPGGN ASQVQQQMYV QNMQQQLHQQ MMHQGQTMMY PSVAHTIPPQ
0401: LGNVNLNMAT QYPQQQQNKL VAPRKSSNIK ITDPNTNKEV VLGRPSPNVA AQPQQVSGVA TQPMVYYTNP QQTSYSQSGT YYSGTAGVVP TGSQGRFSYP
0501: ATQAGQSIPF MNPSMSNTVP ASHKDNIAGP ATSGQSQLIG KPQGGLHMEK PVPSVKISMP AGRSDASKFR VADHAVQHRQ KDSEVISGAM VSNKPVIEKE
0601: SKAPSIPEKH SKESTAPSTV EKHPTTVTQP LPIEAAKPET DAATYSGANS PSFLTGADEK KESLPITDSL KDNKKNATRN DTKNLPQQPQ PASPAEELKG
0701: QTSVKVGDDV VGHMETKSFD SEQVDLTSKG SGLTSATSES SISPILGKSE ADSTSVNAAD VPAMVISSAK LSSASTGEPQ AVESLGVAAV KSKEIEITHQ
0801: ISPESGDVKI MSDSTENESH DCMVDLAEQA SLATSKPGNS DATSFVTDPQ ELPKECTTSV PEEHSLMNTS HNKDTETLSA SVDANDVSEA NSGTSSESTS
0901: QIANDKDIRS SIQETGLAVS GITPGMLPVN HSVASEGQVK HADGAKDESS TEQSSAAPTG SVRPLSREKP TAELTRTKSA AGRKKKRKEM LSKADAAGTS
1001: DLYNAYKGPQ EQSDSVATSE GADSSSTVDG THVLPEESER EAMCEDDGKK KVEPDDWEDA ADMSTPKLQS SDSGNQASAV QLPDSDMTEA NGRKKYSRDF
1101: LLTFAHQYSS LPVGIRMDTV TSTLFKDLAG KSYVIDREPH PSSARGSDRP TSRGDRRGPA MDDDKWLKSG VPYSPNRDAH MDLTNGPAMN YRGGPGATHG
1201: VLRNPRAALL VGPQSNAPQV PRSGSDADRW QQKGLIPSPV TPMQVMHKAE KKYVVGKVSD EEQAKQRQLK AILNKLTPQN FDKLFEQVKE VNIDNVSTLT
1301: GVISQIFDKA LMEPTFCEMY ANFCSHLAGA LPDFSEDNEK ITFKRLLLNK CQEEFERGER EEAEADKTEE EGEIKQTKEE REEKRVKARR RMLGNIRLIG
1401: ELYKKRMLTE RIMHECIKKL LGNYQNPDEE NIEALCKLMS TIGEMIDHPK AKEHMDAYFD RMRNLSTSQL ISSRVRFLLR DSIDLRKNKW QQRRKVDGPK
1501: KIDEVHRDAA QERHAQSQSS RSRGPVVSSL PRRGAPSMDY GSRGSAAPLV SPGPQQRGRG FGNQDIRYEQ ERHQFDRTVP LPQRSVKDEA ITLGPQGGLA
1601: RGMSLRGQPP VSNSELPSVV DQRRIVSGPN GYNSVPSTTR EDTSSRIPDR FSGRIAPAAQ SASSSHRPAS QEGRSGNKSY SEEELREKSI ATIREYYSAK
1701: DEKEVALCIE ELNAPSFYPS LVSLWVNDSF ERKDMERELL AKLFVGLYNG GYNLLSKPQL IEGLSSVLAS LEDALSDSPR AAEYLGRLLA RFVVEKILVL
1801: QDVGKLIEEG GEEPGHLVQE GIAADVLGAV LEWIKTEKGD SFLKEAKTSS NLKLEDFRPQ HLKRSKLDAF MLT
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
Arabidopsis Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.