Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
25724727
endoplasmic reticulum: 27224218 nucleus: 28499913 |
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID:
25724727
doi
Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan; National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan; National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan. Electronic address: skomatsu@affrc.go.jp.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75579 | Soybean | endoplasmic reticulum | 92.38 | 93.14 |
| KRH48862 | Soybean | nucleus | 62.55 | 68.64 |
| KRH66436 | Soybean | endoplasmic reticulum | 62.28 | 68.59 |
| CDX89056 | Canola | cytosol | 19.49 | 60.99 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 21.77 | 60.79 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 52.48 | 56.31 |
| GSMUA_Achr11P... | Banana | cytosol | 10.07 | 55.89 |
| PGSC0003DMT400004341 | Potato | nucleus | 47.31 | 48.09 |
| Solyc01g088700.2.1 | Tomato | nucleus | 47.2 | 48.03 |
| CDY42674 | Canola | plastid | 40.07 | 46.35 |
| Bra014505.1-P | Field mustard | cytosol | 40.88 | 45.35 |
| GSMUA_Achr11P... | Banana | nucleus | 40.88 | 45.35 |
| GSMUA_Achr11P... | Banana | nucleus | 39.52 | 45.18 |
| AT3G60240.4 | Thale cress | cytosol | 41.7 | 44.35 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 43.22 | 40.84 |
| HORVU2Hr1G041760.1 | Barley | nucleus | 38.6 | 38.85 |
| TraesCS2D01G215300.1 | Wheat | nucleus | 39.52 | 38.76 |
| TraesCS2A01G209100.1 | Wheat | nucleus | 39.47 | 38.65 |
| TraesCS2B01G235100.1 | Wheat | golgi | 39.09 | 38.29 |
| HORVU2Hr1G041770.2 | Barley | nucleus | 38.38 | 37.7 |
| TraesCS2B01G408800.1 | Wheat | nucleus | 31.68 | 32.62 |
| TraesCS2A01G390600.1 | Wheat | nucleus, plastid | 31.57 | 32.55 |
| TraesCS2D01G388100.1 | Wheat | nucleus | 31.46 | 32.45 |
| HORVU2Hr1G092940.7 | Barley | nucleus | 31.36 | 32.31 |
| Zm00001d021741_P001 | Maize | nucleus | 32.01 | 32.29 |
| KXG36457 | Sorghum | cytosol | 32.06 | 32.17 |
| Zm00001d006573_P002 | Maize | cytosol | 31.68 | 31.72 |
| KXG26815 | Sorghum | nucleus | 31.79 | 31.62 |
| Zm00001d025979_P007 | Maize | nucleus | 30.87 | 31.15 |
| CDX98293 | Canola | cytosol | 11.32 | 29.13 |
| KRH72326 | Soybean | endoplasmic reticulum | 10.62 | 24.87 |
| KRH03030 | Soybean | endoplasmic reticulum | 10.51 | 24.46 |
| KRH63081 | Soybean | endoplasmic reticulum | 10.29 | 24.42 |
| KRH55033 | Soybean | endoplasmic reticulum | 10.23 | 24.26 |
| Os07t0555200-01 | Rice | nucleus, plastid | 14.32 | 20.29 |
Protein Annotations
| Gene3D:1.25.40.180 | EntrezGene:100796636 | MapMan:17.4.2.3.2 | EMBL:ACUP02005348 | InterPro:ARM-type_fold | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_08G340500 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR003891 | InterPro:IPR016021 | InterPro:Initiation_fac_eIF4g_MI | UniProt:K7LAK0 | EnsemblPlants:KRH46542 | ProteinID:KRH46542 |
| ProteinID:KRH46542.1 | InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 | PFAM:PF02847 | PFAM:PF02854 | PFscan:PS51366 |
| PANTHER:PTHR23253 | PANTHER:PTHR23253:SF9 | SMART:SM00543 | SMART:SM00544 | SUPFAM:SSF48371 | UniParc:UPI000296C885 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:45663642..45673517
Molecular Weight (calculated)
197993.0 Da
IEP (calculated)
7.457
GRAVY (calculated)
-0.697
Length
1837 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSFNQSKSDK SDAVYRKSGR PGSFNQQRGP SGGAYGKGGG GGAGPSPSLS SNRSFNKKSN NNAQGGQSRV NPTPVNSTES NSTYAARTVP NGSHVQPHIH
0101: GGSDAPITNA TAKPSESLAA QRSTRTVPKA PTSQPPAMSS YPAAPTTPAK DASKAFPFQF GSISPGFMNG MAIPARTSSA PPNIDEQRRE QARHDSFRPA
0201: PSMPTPPVPK QQAVKKDTSV ADQSNTGETY TGTRAKKDTQ VSPLPPASQM QKPSVISLSG MSMPMPYHQS QASVHFGGPN PQIQSQGMSS APLQMPLPMP
0301: LPIGSAAQVQ QQVFVPGLQP HPIHPQGIMH QGQSMGFNPQ IGPQLPHQLG NMGIGISPQY PPQQGGKFAA PRKTTPVKIT HPETHEELRL DKRTDAYSDG
0401: GSSGARPHSG MPSQSQPAQQ FAASHPINYY PSSSYSTNPL FYPTPSSLPL TSSQITPNSQ PPRFNYAVNH GPQNVSFVNS SSHSSLPVNK AGTSIPGNAE
0501: PPNPEFSWDV HNTFLSAPSG VTSVSIKPSG GSGVVDSSFS NSSNQKSGSP SSSLTSGDAF SSVPLKGSET TEISSQQSKV SSDSSALNSL PNLSAACTVK
0601: PTSASLLLPT SAVSEESVSV LPNNEGRKKE SLSRSNSLKD NQKKIHKKGQ SQHQVAVQSP SVANVPSQAV DGDIPVGEVS ETVGTKTNHS AAVTSEDLSA
0701: AASDMLSATS ESITSAVETK TNDSTQVSAC ASAEGPVTQV ADNLNNHKNA EIDELLQQDK PLQPDILEMV RKTENLSLQG SKQSVSDGGT ELKQPKQGAA
0801: KLSTEVVTLR TVQQGQGQDE STSCSAECDR TADDKGISIS TTLDSKDVCL NRNDSVVSNE AVSSNSGTSD QQSADLLETT SKQCKDDSAE NAGSGSVSLP
0901: ASGTKDKPIS ESSKVKPTSK GKKKRKEILQ KADAAGSTSD LYNAYKGPEE KKETVLSSEK TESGSTSENL EQLPTDTAQP DAVAEQSKQS KAELDDWEDA
1001: ADMSTPKLEV SDETGQVSDG SAITAKKYSR DFLLKFAEQC TDLPGGFEIT ADIAEALMGA NVSSHVIEHS STGRIIDRSG GMSRRGSGVI EEDKWNKVSN
1101: AFHSGMRLDG VGGNAGFRPG QGGNFGVLRN PRTQTPLQYA GGILSGPMQS MVNQGGMQRN SPDGERWQRT NSFQQRGLIP SPSTPQTPLQ MMHKAEKKYE
1201: VGKVTDEEQA KQRQLKGILN KLTPQNFEKL FDQVRAVNID NVVTLNGVIS QIFEKALMEP TFCEMYANFC FHLAAVLPDL SQDNEKITFK RLLLNKCQEE
1301: FERGEREQEE ANKADEGEVK LSNEEREEKR TKARRRMLGN IRLIGELYKK KMLTERIMHE CIKKLLGQYQ DPDEEDIEAL CKLMSTIGEM IDHPKAKEHM
1401: DAYFEMMRSL SNNMNLSSRL RFMLKDVIDL RKNKWQQRRK VEGPKKIEEV HRDASQERLA QASRLGRGPG NNPPRRIPMD FGPRGSSMLS PNAQMGGLRG
1501: LPTQVRGYGS QDARMEDRQT YEARTLSVPL PQRPLGDESI TLGPMGGLAR GMSIRGPPAV SSSTGLNNGY NNLSERTSYS SREDPASRYT PDRFAGSTAY
1601: DQSIVQDRNM NYGNRDLRNA NRILDKPVVT SPPARTQGTA ASQSISPERL QDMSMAAIRE YYSARDVNEV VLCIKDLNSP GFHPSMVSLW VTDSFERKDN
1701: ERDLLAQLLV KVVKSQDGPL GQAQLIKGFE SVLSTLEDAV NDAPKAPEFL GRVFAKAITE HVVSLKEIGR LIHEGGEEPG SLLEAGLAAD VLGSTLEVIK
1801: MEKGDAVLSE ICTSSNLRLE TFRPPEPLKS RKLEKFI
0101: GGSDAPITNA TAKPSESLAA QRSTRTVPKA PTSQPPAMSS YPAAPTTPAK DASKAFPFQF GSISPGFMNG MAIPARTSSA PPNIDEQRRE QARHDSFRPA
0201: PSMPTPPVPK QQAVKKDTSV ADQSNTGETY TGTRAKKDTQ VSPLPPASQM QKPSVISLSG MSMPMPYHQS QASVHFGGPN PQIQSQGMSS APLQMPLPMP
0301: LPIGSAAQVQ QQVFVPGLQP HPIHPQGIMH QGQSMGFNPQ IGPQLPHQLG NMGIGISPQY PPQQGGKFAA PRKTTPVKIT HPETHEELRL DKRTDAYSDG
0401: GSSGARPHSG MPSQSQPAQQ FAASHPINYY PSSSYSTNPL FYPTPSSLPL TSSQITPNSQ PPRFNYAVNH GPQNVSFVNS SSHSSLPVNK AGTSIPGNAE
0501: PPNPEFSWDV HNTFLSAPSG VTSVSIKPSG GSGVVDSSFS NSSNQKSGSP SSSLTSGDAF SSVPLKGSET TEISSQQSKV SSDSSALNSL PNLSAACTVK
0601: PTSASLLLPT SAVSEESVSV LPNNEGRKKE SLSRSNSLKD NQKKIHKKGQ SQHQVAVQSP SVANVPSQAV DGDIPVGEVS ETVGTKTNHS AAVTSEDLSA
0701: AASDMLSATS ESITSAVETK TNDSTQVSAC ASAEGPVTQV ADNLNNHKNA EIDELLQQDK PLQPDILEMV RKTENLSLQG SKQSVSDGGT ELKQPKQGAA
0801: KLSTEVVTLR TVQQGQGQDE STSCSAECDR TADDKGISIS TTLDSKDVCL NRNDSVVSNE AVSSNSGTSD QQSADLLETT SKQCKDDSAE NAGSGSVSLP
0901: ASGTKDKPIS ESSKVKPTSK GKKKRKEILQ KADAAGSTSD LYNAYKGPEE KKETVLSSEK TESGSTSENL EQLPTDTAQP DAVAEQSKQS KAELDDWEDA
1001: ADMSTPKLEV SDETGQVSDG SAITAKKYSR DFLLKFAEQC TDLPGGFEIT ADIAEALMGA NVSSHVIEHS STGRIIDRSG GMSRRGSGVI EEDKWNKVSN
1101: AFHSGMRLDG VGGNAGFRPG QGGNFGVLRN PRTQTPLQYA GGILSGPMQS MVNQGGMQRN SPDGERWQRT NSFQQRGLIP SPSTPQTPLQ MMHKAEKKYE
1201: VGKVTDEEQA KQRQLKGILN KLTPQNFEKL FDQVRAVNID NVVTLNGVIS QIFEKALMEP TFCEMYANFC FHLAAVLPDL SQDNEKITFK RLLLNKCQEE
1301: FERGEREQEE ANKADEGEVK LSNEEREEKR TKARRRMLGN IRLIGELYKK KMLTERIMHE CIKKLLGQYQ DPDEEDIEAL CKLMSTIGEM IDHPKAKEHM
1401: DAYFEMMRSL SNNMNLSSRL RFMLKDVIDL RKNKWQQRRK VEGPKKIEEV HRDASQERLA QASRLGRGPG NNPPRRIPMD FGPRGSSMLS PNAQMGGLRG
1501: LPTQVRGYGS QDARMEDRQT YEARTLSVPL PQRPLGDESI TLGPMGGLAR GMSIRGPPAV SSSTGLNNGY NNLSERTSYS SREDPASRYT PDRFAGSTAY
1601: DQSIVQDRNM NYGNRDLRNA NRILDKPVVT SPPARTQGTA ASQSISPERL QDMSMAAIRE YYSARDVNEV VLCIKDLNSP GFHPSMVSLW VTDSFERKDN
1701: ERDLLAQLLV KVVKSQDGPL GQAQLIKGFE SVLSTLEDAV NDAPKAPEFL GRVFAKAITE HVVSLKEIGR LIHEGGEEPG SLLEAGLAAD VLGSTLEVIK
1801: MEKGDAVLSE ICTSSNLRLE TFRPPEPLKS RKLEKFI
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQVTGEPGV GGPTNPTESF NRNTGPIPKA PTSQSTVMSS KINETPNTAK VAASGDASQA FPLQFGSLGP DLMVPARTTS APPNMDDQKR AQMQQSSLRT
0201: ASNVPASVPK KDSSNKGADN QLMRKEGHNP SSEKADIQVP HIAPPSQTQK SPITNIRMPS VQTPYQHTQV PHPVHFGGPN MHMQTPVTAT SFQMPMPMAL
0301: SMGNTPQIPP QVFYQGHPPH PMHHQGMMHQ AQGHGFATPM GAQIHPQLGH VGVGLSPQYP QQQGGKYGGA RKTTPVKITH PDTHEELRLD RRGDPYSEGD
0401: STALKPHSNP PPRSQPVSSF APRPVNLVQP SYNSNTMIYP PVSVPLNNGP MSSAQAPRYH YPVIDGSQRV QLINQPAHTA PQLIRPAAPA HLSSDSTSSV
0501: KARNAQNVMS SALPVNAKVS VKPAGVSEKL GSPKDRSHGE VNISLSQKNV EACSLSSSQQ PKPSFVSGVP NSSAPPAKSP VETVPLAKSS VETVPPVKSS
0601: VETAPVTTTE IRRAEMVSES ISVEDQTCKV EPPHNLTENR GQTMPDSLVS DPETATVAAK ENLSLPATNG FRKQLLKVST TSDAPTSDSV DTSIDKSTEG
0701: SSHASSEISG SSPQEKDLKC DNRTASDKLD ERSVISDAKH ETLSGVLEKA QNEVDGATDV CPVSEKLAVT DDTSSDLPHS THVLSSTVPL GHSETHKSAV
0801: ETNTRRNTST KGKKKIKEIL QKADAAGTTS DLYMAYKGPE EKKESSNVVH DVSNQNLLPA IPQAVEAIVD TEPVKNEPED WEDAADVSTP KLETADNSVN
0901: AKRGSSDEVS DNCINTEKKY SRDFLLKFAD LCTALPEGFD VSPDIANALI VAYMGASHHE HDSYPTPGKV MDRQASGARL DRRPSNVAGD DRWTKNQGSL
1001: PAGYGGNVGF RPGQGGNSGV LRNPRMQGPI ISRPMQPVGP MGGMGRNTPD LERWQRGSNF QQKGLFPSPH TPMQVMHKAE RKYQVGTIAD EEQAKQRQLK
1101: SILNKLTPQN FEKLFEQVKS VNIDNAVTLS GVISQIFDKA LMEPTFCEMY ADFCFHLSGA LPDFNENGEK ITFKRLLLNK CQEEFERGEK EEEEASRVAE
1201: EGQVEQTEEE REEKRLQVRR RMLGNIRLIG ELYKKRMLTE KIMHACIQKL LGYNQDPHEE NIEALCKLMS TIGVMIDHNK AKFQMDGYFE KMKMLSCKQE
1301: LSSRVRFMLI NAIDLRKNKW QERMKVEGPK KIEEVHRDAA QERQTQANRL SRGPSMNSSG RRGHMEFSSP RGGGGMLSPP AAQMGSYHGP PQGRGFSNQD
1401: IRFDDRPSYE PRMVPMPQRS VCEEPITLGP QGGLGQGMSI RRPAVASNTY QSDATQAGGG DSRRPAGGLN GFGSHRPASP VTHGRSSPQE RGTAYVHREF
1501: ASLSRASDLS PEVSSARQVL QGPSATVNSP RENALSEEQL ENLSLSAIKE YYSARDENEI GMCMKDMNSP AYHPTMISLW VTDSFERKDK ERDLLAKLLV
1601: NLVKSADNAL NEVQLVKGFE SVLKTLEDAV NDAPKAAEFL GRIFGKSVTE KVVTLTEIGR LIQEGGEEPG SLIEFGLGGD VLGSVLEMIK TEAGEETLVE
1701: IRRSSGLRIE NFKPHAPNRS KILEKFT
0101: RSQVTGEPGV GGPTNPTESF NRNTGPIPKA PTSQSTVMSS KINETPNTAK VAASGDASQA FPLQFGSLGP DLMVPARTTS APPNMDDQKR AQMQQSSLRT
0201: ASNVPASVPK KDSSNKGADN QLMRKEGHNP SSEKADIQVP HIAPPSQTQK SPITNIRMPS VQTPYQHTQV PHPVHFGGPN MHMQTPVTAT SFQMPMPMAL
0301: SMGNTPQIPP QVFYQGHPPH PMHHQGMMHQ AQGHGFATPM GAQIHPQLGH VGVGLSPQYP QQQGGKYGGA RKTTPVKITH PDTHEELRLD RRGDPYSEGD
0401: STALKPHSNP PPRSQPVSSF APRPVNLVQP SYNSNTMIYP PVSVPLNNGP MSSAQAPRYH YPVIDGSQRV QLINQPAHTA PQLIRPAAPA HLSSDSTSSV
0501: KARNAQNVMS SALPVNAKVS VKPAGVSEKL GSPKDRSHGE VNISLSQKNV EACSLSSSQQ PKPSFVSGVP NSSAPPAKSP VETVPLAKSS VETVPPVKSS
0601: VETAPVTTTE IRRAEMVSES ISVEDQTCKV EPPHNLTENR GQTMPDSLVS DPETATVAAK ENLSLPATNG FRKQLLKVST TSDAPTSDSV DTSIDKSTEG
0701: SSHASSEISG SSPQEKDLKC DNRTASDKLD ERSVISDAKH ETLSGVLEKA QNEVDGATDV CPVSEKLAVT DDTSSDLPHS THVLSSTVPL GHSETHKSAV
0801: ETNTRRNTST KGKKKIKEIL QKADAAGTTS DLYMAYKGPE EKKESSNVVH DVSNQNLLPA IPQAVEAIVD TEPVKNEPED WEDAADVSTP KLETADNSVN
0901: AKRGSSDEVS DNCINTEKKY SRDFLLKFAD LCTALPEGFD VSPDIANALI VAYMGASHHE HDSYPTPGKV MDRQASGARL DRRPSNVAGD DRWTKNQGSL
1001: PAGYGGNVGF RPGQGGNSGV LRNPRMQGPI ISRPMQPVGP MGGMGRNTPD LERWQRGSNF QQKGLFPSPH TPMQVMHKAE RKYQVGTIAD EEQAKQRQLK
1101: SILNKLTPQN FEKLFEQVKS VNIDNAVTLS GVISQIFDKA LMEPTFCEMY ADFCFHLSGA LPDFNENGEK ITFKRLLLNK CQEEFERGEK EEEEASRVAE
1201: EGQVEQTEEE REEKRLQVRR RMLGNIRLIG ELYKKRMLTE KIMHACIQKL LGYNQDPHEE NIEALCKLMS TIGVMIDHNK AKFQMDGYFE KMKMLSCKQE
1301: LSSRVRFMLI NAIDLRKNKW QERMKVEGPK KIEEVHRDAA QERQTQANRL SRGPSMNSSG RRGHMEFSSP RGGGGMLSPP AAQMGSYHGP PQGRGFSNQD
1401: IRFDDRPSYE PRMVPMPQRS VCEEPITLGP QGGLGQGMSI RRPAVASNTY QSDATQAGGG DSRRPAGGLN GFGSHRPASP VTHGRSSPQE RGTAYVHREF
1501: ASLSRASDLS PEVSSARQVL QGPSATVNSP RENALSEEQL ENLSLSAIKE YYSARDENEI GMCMKDMNSP AYHPTMISLW VTDSFERKDK ERDLLAKLLV
1601: NLVKSADNAL NEVQLVKGFE SVLKTLEDAV NDAPKAAEFL GRIFGKSVTE KVVTLTEIGR LIQEGGEEPG SLIEFGLGGD VLGSVLEMIK TEAGEETLVE
1701: IRRSSGLRIE NFKPHAPNRS KILEKFT
Arabidopsis Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.