Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G390600.1 | Wheat | nucleus, plastid | 97.2 | 97.31 |
| TraesCS2D01G388100.1 | Wheat | nucleus | 96.36 | 96.52 |
| HORVU2Hr1G092940.7 | Barley | nucleus | 91.42 | 91.47 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 20.91 | 56.69 |
| GSMUA_Achr11P... | Banana | cytosol | 9.92 | 53.47 |
| KXG26815 | Sorghum | nucleus | 55.1 | 53.22 |
| Zm00001d025979_P007 | Maize | nucleus | 51.91 | 50.88 |
| CDX89056 | Canola | cytosol | 16.59 | 50.43 |
| PGSC0003DMT400004663 | Potato | nucleus | 19.79 | 42.63 |
| GSMUA_Achr11P... | Banana | nucleus | 32.68 | 36.28 |
| KRH66436 | Soybean | endoplasmic reticulum | 32.96 | 35.25 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 33.24 | 34.64 |
| KRH48862 | Soybean | nucleus | 32.4 | 34.53 |
| GSMUA_Achr11P... | Banana | nucleus | 31.5 | 33.94 |
| PGSC0003DMT400004341 | Potato | nucleus | 33.13 | 32.71 |
| Solyc01g088700.2.1 | Tomato | nucleus | 32.85 | 32.47 |
| Bra014505.1-P | Field mustard | cytosol | 29.82 | 32.13 |
| CDY42674 | Canola | plastid | 28.59 | 32.12 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 34.7 | 31.84 |
| KRH46542 | Soybean | nucleus | 32.62 | 31.68 |
| KRH75579 | Soybean | endoplasmic reticulum | 32.29 | 31.61 |
| AT3G60240.4 | Thale cress | cytosol | 29.93 | 30.92 |
| TraesCS2B01G235100.1 | Wheat | golgi | 30.55 | 29.07 |
| CDX98293 | Canola | cytosol | 11.55 | 28.85 |
| Solyc08g077700.2.1 | Tomato | nucleus | 26.63 | 28.82 |
| TraesCS2B01G373600.1 | Wheat | cytosol | 9.87 | 22.31 |
Protein Annotations
| Gene3D:1.25.40.180 | MapMan:17.4.2.3.2 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003891 | InterPro:IPR016021 | InterPro:Initiation_fac_eIF4g_MI |
| InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 | PFAM:PF02847 | PFAM:PF02854 | PFscan:PS51366 | PANTHER:PTHR23253 |
| PANTHER:PTHR23253:SF35 | SMART:SM00543 | SMART:SM00544 | SUPFAM:SSF48371 | EnsemblPlantsGene:TraesCS2B01G408800 | EnsemblPlants:TraesCS2B01G408800.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:581700481..581708900
Molecular Weight (calculated)
195649.0 Da
IEP (calculated)
7.389
GRAVY (calculated)
-0.596
Length
1784 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYRNQFRPDR FNDNTNAARR TGRGCIGGTH HWVVSGGRGS AAPGTRLRSP PNRSGRPGTV QQYRPRSPAS VVPQGNATNY TPVVSAADEH AEPVNPASLG
0101: SLESQKSSNA PDQSDVVNLE SAEGARAEDS SVLTIHSEGY SASAFTLQFG TLSPGVITKQ CIPCSTSAPP DLNEKKHEKC QAHRGLLSDE PNVVSMPSAG
0201: EQQKQETKDN LIICSQTDSI DTYDSVPAMV SSNSCVLADP ELPHTPGLYY VAPAEKVSTD SCKVFPRNPS FPTHQQWQKQ DTRKDASQSD TMHKYPASNP
0301: KMTVQIPPPY TPSMAPPSFM LPVNGRPLPA AFQQKQPQVP VEFRGQGVPM GNVPHVPPFF VHGAQARALQ PPAFVHQGQG LGCAPPACPH LPQLGNMRIT
0401: QELPQQQARS CDEQKRPVRI THPDTHEELM LDRRGHSYID AASGAMPLHH MNQLAQPVTS FPPLHEVYYR PNMYNTGHIY LPTTNAVPAS NRQMCPRMQT
0501: PRHSLDPNIN NQAVTSISPP MQNPWLGASS RLPTNLRSAS EVSSSKGLLP SDVSFPGQGA LKPPTIFLAE NNELSSQIST PTCAAETPTL LRYSVESALS
0601: SQQRVHKLGL EISPQPEKLV SEANLKLPAA TSGLSCSTSP QSVLTQQAQT GSALVDRVTS IAGPQNISAY KLTSVCVASG TSSVEAKLES SAVPSATSSS
0701: GAKGQLYHIV PQSEIFLDTE SKNSKYDGNS ILGKPPLMYT QETLPPKSPT TSIFTESLKA RVNHVPLPET SEANCSAPLQ MQDMMREEHT VNAEVTCSKS
0801: KAEQVDMTMH MPGASSGSGN GTDVSKLVNV PTCAESGDLH LSLHIGNVSP SDKNNGSSSD VQIGSCSLND SIQDNENIPM TMAIASNSSS AHKEIERGSI
0901: DSVVSNQCSV AAASMVKTKK PVLEAAKPKN THGRRKKRKE ILPKSSDSAE EVVQSSSTVD KEICALDAEM GSSAGSNDNQ NKNDIFDWEG DMEISRDNYG
1001: YGQKRYSRDF LLTFAQSCVN LPEGFKIGSD IHDAIINVGS EHNPNRERTK DRVSTISQAN RHMGSNKLND NNWRKLHPPF SGRDPLSGRG SSRNGSQNQL
1101: PNQYNGEILS RAMKEVACQR SMSRGSVDQR WQHRTNQAMS SPSQVSMPVM HKAEKKYEIG KVSDEEEVKQ RQLKAILNKL TPQNFEKLFE QVKALNIDNI
1201: ITLSGVISQI FDKALMEPTF CEMYASFCFS LAGELPNFVK DDEKITFKRL LLNKCQEEFE RGEREQAEAE KAEEEGGMKQ SENEREEKRL RARRRMLGNI
1301: RLIGELYKKK MLTERIMHEC IKKLLGEYQH PDEEDLEALC KLMSTIGEMI DHIRAKVHMD FYFDIIHKLS ANSKLSSRIR FMLEDVIDLR NNKWRQRRKV
1401: EGPKKIEEVR RDAVKQKMSQ STRVGSSPNY NSSASSISSS ARPGPPPDYG VRGSSASRGS SQVRVYGSQN VNLDTRYQTS NRAMSVPLHQ RRSDKSIRLS
1501: PQGDLGREMS ICGKPPASND ILPEVPLNSH HGQTLKSSRQ SSFTGSTSNQ TNYQATAGAP KIQSWGTADH ALPILVTTAS PVGQMHTPST AMNDICYEAI
1601: ILPEEILQEK AILTIKEFYS AKDEKEVGLC MKELNAPSFY PSLVSLWIND SFERKDLERE LLAKLLVNLC KSQGSLLSQT VLLQGFQNVL STLEDAVTDA
1701: PKATEFLGRI FAKVILEDVL SLTEIGVLLQ DGGEEPASDQ RLASEVLGSM LESIRVERGD SAVDEIRAKS NPHPENLRQP GLCA
0101: SLESQKSSNA PDQSDVVNLE SAEGARAEDS SVLTIHSEGY SASAFTLQFG TLSPGVITKQ CIPCSTSAPP DLNEKKHEKC QAHRGLLSDE PNVVSMPSAG
0201: EQQKQETKDN LIICSQTDSI DTYDSVPAMV SSNSCVLADP ELPHTPGLYY VAPAEKVSTD SCKVFPRNPS FPTHQQWQKQ DTRKDASQSD TMHKYPASNP
0301: KMTVQIPPPY TPSMAPPSFM LPVNGRPLPA AFQQKQPQVP VEFRGQGVPM GNVPHVPPFF VHGAQARALQ PPAFVHQGQG LGCAPPACPH LPQLGNMRIT
0401: QELPQQQARS CDEQKRPVRI THPDTHEELM LDRRGHSYID AASGAMPLHH MNQLAQPVTS FPPLHEVYYR PNMYNTGHIY LPTTNAVPAS NRQMCPRMQT
0501: PRHSLDPNIN NQAVTSISPP MQNPWLGASS RLPTNLRSAS EVSSSKGLLP SDVSFPGQGA LKPPTIFLAE NNELSSQIST PTCAAETPTL LRYSVESALS
0601: SQQRVHKLGL EISPQPEKLV SEANLKLPAA TSGLSCSTSP QSVLTQQAQT GSALVDRVTS IAGPQNISAY KLTSVCVASG TSSVEAKLES SAVPSATSSS
0701: GAKGQLYHIV PQSEIFLDTE SKNSKYDGNS ILGKPPLMYT QETLPPKSPT TSIFTESLKA RVNHVPLPET SEANCSAPLQ MQDMMREEHT VNAEVTCSKS
0801: KAEQVDMTMH MPGASSGSGN GTDVSKLVNV PTCAESGDLH LSLHIGNVSP SDKNNGSSSD VQIGSCSLND SIQDNENIPM TMAIASNSSS AHKEIERGSI
0901: DSVVSNQCSV AAASMVKTKK PVLEAAKPKN THGRRKKRKE ILPKSSDSAE EVVQSSSTVD KEICALDAEM GSSAGSNDNQ NKNDIFDWEG DMEISRDNYG
1001: YGQKRYSRDF LLTFAQSCVN LPEGFKIGSD IHDAIINVGS EHNPNRERTK DRVSTISQAN RHMGSNKLND NNWRKLHPPF SGRDPLSGRG SSRNGSQNQL
1101: PNQYNGEILS RAMKEVACQR SMSRGSVDQR WQHRTNQAMS SPSQVSMPVM HKAEKKYEIG KVSDEEEVKQ RQLKAILNKL TPQNFEKLFE QVKALNIDNI
1201: ITLSGVISQI FDKALMEPTF CEMYASFCFS LAGELPNFVK DDEKITFKRL LLNKCQEEFE RGEREQAEAE KAEEEGGMKQ SENEREEKRL RARRRMLGNI
1301: RLIGELYKKK MLTERIMHEC IKKLLGEYQH PDEEDLEALC KLMSTIGEMI DHIRAKVHMD FYFDIIHKLS ANSKLSSRIR FMLEDVIDLR NNKWRQRRKV
1401: EGPKKIEEVR RDAVKQKMSQ STRVGSSPNY NSSASSISSS ARPGPPPDYG VRGSSASRGS SQVRVYGSQN VNLDTRYQTS NRAMSVPLHQ RRSDKSIRLS
1501: PQGDLGREMS ICGKPPASND ILPEVPLNSH HGQTLKSSRQ SSFTGSTSNQ TNYQATAGAP KIQSWGTADH ALPILVTTAS PVGQMHTPST AMNDICYEAI
1601: ILPEEILQEK AILTIKEFYS AKDEKEVGLC MKELNAPSFY PSLVSLWIND SFERKDLERE LLAKLLVNLC KSQGSLLSQT VLLQGFQNVL STLEDAVTDA
1701: PKATEFLGRI FAKVILEDVL SLTEIGVLLQ DGGEEPASDQ RLASEVLGSM LESIRVERGD SAVDEIRAKS NPHPENLRQP GLCA
001: MQQQGEPSVL SLRPGGGGGK SRLFVPRFSS SSSFDLTNGG SEETPFPVKR ENSGERVRFS REEILQHRES VQVSDEILRR CKEIAVELFG EEQSWGNHAA
101: ESKITNHTQH RHTETDNRDW HSRSQIPTSG KEWLRDDPRE AKSTWQGSGP TPVLIKAEVP WSAKRGALSD KDRVVKSVKG ILNKLTPEKY ELLKGQLIDA
201: GITSADILKE VIQLIFENAI LQPTFCEMYA LLCFDINGQL PSFPSEEPGG KEITFKRVLL NNCQEAFEGA GKLKEEIRQM TNPDQEMERM DKEKMAKLRT
301: LGNIRLIGEL LKQKMVPEKI VHHIVQELLG DDTKACPAEG DVEALCQFFI TIGKQLDDSP RSRGINDTYF GRLKELARHP QLELRLRFMV QNVVDLRANK
401: WVPRREEVKA KKINEIHSEA ERNLGMRPGA MASMRNNNNN RAAVSGAADG MGLGNILGRP GTGGMMPGMP GTRVMPMDED GWEMARTRSM PRGNRQTVQQ
501: PRFQPPPAIN KSLSVNSRLL PQGSGGLLNG GGRPSPLLQG NGSSSAPQAS KPIPTVEKPQ PRSQPQPQPQ AAPLANSLNA GELERKTKSL LEEYFSIRLV
601: DEALQCVEEL KSPSYHPELV KETISLGLEK NPPLVEPIAK LLKHLISKNV LTSKDLGAGC LLYGSMLDDI GIDLPKAPNS FGEFLGELVS AKVLDFELVR
701: DVLKKMEDEW FRKTVLNAVI KSVRECPSGQ SVLDSQAVEV EACQSLL
101: ESKITNHTQH RHTETDNRDW HSRSQIPTSG KEWLRDDPRE AKSTWQGSGP TPVLIKAEVP WSAKRGALSD KDRVVKSVKG ILNKLTPEKY ELLKGQLIDA
201: GITSADILKE VIQLIFENAI LQPTFCEMYA LLCFDINGQL PSFPSEEPGG KEITFKRVLL NNCQEAFEGA GKLKEEIRQM TNPDQEMERM DKEKMAKLRT
301: LGNIRLIGEL LKQKMVPEKI VHHIVQELLG DDTKACPAEG DVEALCQFFI TIGKQLDDSP RSRGINDTYF GRLKELARHP QLELRLRFMV QNVVDLRANK
401: WVPRREEVKA KKINEIHSEA ERNLGMRPGA MASMRNNNNN RAAVSGAADG MGLGNILGRP GTGGMMPGMP GTRVMPMDED GWEMARTRSM PRGNRQTVQQ
501: PRFQPPPAIN KSLSVNSRLL PQGSGGLLNG GGRPSPLLQG NGSSSAPQAS KPIPTVEKPQ PRSQPQPQPQ AAPLANSLNA GELERKTKSL LEEYFSIRLV
601: DEALQCVEEL KSPSYHPELV KETISLGLEK NPPLVEPIAK LLKHLISKNV LTSKDLGAGC LLYGSMLDDI GIDLPKAPNS FGEFLGELVS AKVLDFELVR
701: DVLKKMEDEW FRKTVLNAVI KSVRECPSGQ SVLDSQAVEV EACQSLL
Arabidopsis Description
EIF(ISO)4G2Eukaryotic translation initiation factor isoform 4G-2 [Source:UniProtKB/Swiss-Prot;Acc:O82233]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.