Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025979_P007 | Maize | nucleus | 88.79 | 90.11 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 19.82 | 55.62 |
| TraesCS2D01G388100.1 | Wheat | nucleus | 53.38 | 55.36 |
| TraesCS2A01G390600.1 | Wheat | nucleus, plastid | 53.22 | 55.16 |
| TraesCS2B01G408800.1 | Wheat | nucleus | 53.22 | 55.1 |
| HORVU2Hr1G092940.7 | Barley | nucleus | 52.63 | 54.51 |
| GSMUA_Achr11P... | Banana | cytosol | 9.75 | 54.38 |
| CDX89056 | Canola | cytosol | 15.7 | 49.4 |
| PGSC0003DMT400004663 | Potato | nucleus | 19.06 | 42.51 |
| GSMUA_Achr11P... | Banana | nucleus | 31.78 | 36.53 |
| GSMUA_Achr11P... | Banana | nucleus | 31.19 | 34.78 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 32.05 | 34.58 |
| KRH66436 | Soybean | endoplasmic reticulum | 30.97 | 34.29 |
| KRH48862 | Soybean | nucleus | 31.08 | 34.29 |
| Solyc01g088700.2.1 | Tomato | nucleus | 31.84 | 32.58 |
| PGSC0003DMT400004341 | Potato | nucleus | 31.67 | 32.37 |
| CDY42674 | Canola | plastid | 27.61 | 32.12 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 33.62 | 31.94 |
| KRH46542 | Soybean | nucleus | 31.62 | 31.79 |
| KRH75579 | Soybean | endoplasmic reticulum | 31.19 | 31.61 |
| Bra014505.1-P | Field mustard | cytosol | 28.26 | 31.52 |
| AT3G60240.4 | Thale cress | cytosol | 28.8 | 30.8 |
| CDX98293 | Canola | cytosol | 11.59 | 29.97 |
| KXG36457 | Sorghum | cytosol | 28.53 | 28.78 |
| Solyc08g077700.2.1 | Tomato | nucleus | 24.96 | 27.97 |
| EES12452 | Sorghum | cytosol | 10.29 | 24.02 |
Protein Annotations
| Gene3D:1.25.40.180 | MapMan:17.4.2.3.2 | UniProt:A0A1B6PMC3 | InterPro:ARM-type_fold | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR003891 | InterPro:IPR016021 |
| InterPro:Initiation_fac_eIF4g_MI | EnsemblPlants:KXG26815 | ProteinID:KXG26815 | ProteinID:KXG26815.1 | InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 |
| PFAM:PF02847 | PFAM:PF02854 | PFscan:PS51366 | PANTHER:PTHR23253 | PANTHER:PTHR23253:SF35 | SMART:SM00543 |
| SMART:SM00544 | EnsemblPlantsGene:SORBI_3006G164800 | SUPFAM:SSF48371 | UniParc:UPI00081AE0F3 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:+:52236740..52245320
Molecular Weight (calculated)
203100.0 Da
IEP (calculated)
7.722
GRAVY (calculated)
-0.637
Length
1847 amino acids
Sequence
(BLAST)
(BLAST)
0001: MYRNQFRSDR LNDHATTARR PGRGSGSSTH WVVSGGRGST APAARPRSPP YRSGRPGSVQ QQYRPRSPAG APTQGNATGC CPPCGSAAAA EHKGPVNQET
0101: FGSLDNVKPS NVPAQSDVLS SVSAEGTWAA DSPTPTLQTK GYSSPPFTLQ FGTFSPGVIN KQETTSCTSS GPPDLNGNKH EKACHGLHYN PNTVSSSPIQ
0201: ELQKQEARDD LVIGGETDLI GKYKNVHVPE LHETQTMLNS VPPTSKVCTD SCKVLLRTMS SPTQQQCQNQ EETKNTVSAN QTDTAYKYPA TKPKISVQIP
0301: ASYTPNMAPP QFMLPVPGRS MPVAFQQKQP QVPIEFRGPG FQMQSIGSVS GSLPVKMAVP LGNSPHIQPM FVHGAQPRAF HQQSFIHHGQ GFGCAPPANC
0401: HLPQFGNMRI AQELSQQHPR SSDEQKRTIK ITHPETHEEL MLDRRGHSFI GVPASGQIPL NNINQLPHSV QTFSPLQKVY YPRPGTYNSA PIYLPNSTAV
0501: PLASRQISSK IQPPMHGFDS TNSNQPITSI RPPMPTSWLD ATSRPLTNLH TASEISNFKG MLPSSLPAPV HVELKPPITL PAEKNSESTI SNQQNYRKIG
0601: PEMSPEPVDL VYEGSNKDSV ATCDISCNLI SQAVSTQQAQ TRPASADHAT PAVGPQTILT SNLPLESTAC CKSSVKAKPI EVEESLVVPT TFSSHAKLES
0701: SHTEASGRTA SVILTATSLV SKIDGTSPTN RNYKYHGNSI LGKPPLIYAQ EMVSPKFAGS NTSPEGLGKA KVNPVPFQEK FSSELNDLVP LQNHDFMIEE
0801: HVPDEKGMCS ESKTEQVDVT APGTAFGLED DTSVAKSGRF HACHQSVDLH PSIYIGGIQT SNDSQQPSSD AEIITSQSEN KQNNSRVDSA RDVKNAAPIS
0901: TSAISQRKTE QERIDSEISN PCSTTAASVV QTKKVVLEST KAKSINGRRK KRKETLPKGS GQKYYDLDSA PSSLNENVES FVTSEDVQCS LNCTWDAEKD
1001: NSTGGNDCQN RSDLFSWEDT AENSAEKLKV LGGTHSKSGA EVNKDKSEFE HKKYSRDFLL TFAQSCIELP AGFMIGLDIS EAVMSVHVGA PFIDNTQLNP
1101: NHARIKDRGS RANRHVAGKF DDDKWRKQFG SPVSGRNQLS DNVHQPAFSN WDAVQHVGNG SVRSISQSQP FSQYSGEMLS RAMKEVVSQR SMSRGSVDER
1201: WQHRTNAQGI SSPSQVSMPV MHKAEKKYEI GKVSDEEGSK QRQLKAILNK LTPQNFEKLF AQVKELNIDN VVTLTGVISQ IFDKALMEPT FCEMYASFCF
1301: RLAGDLPNFV KDDEKITFKR LLLNKCQEEF ERGEREQAEA DKAEEEGGAK QSEGEREEKR IRARRRMLGN IRLIGELYKK KMLTERIMHE CINKLLGEYQ
1401: NPDEEDLEAL CKLMSTIGEM IDHPRAKVHM DFYFDLIQKL SENVKLSSRI RFMLEDVIDL RKNKWRQRRK VEGPKKIEEV RRDAVKQKFG QSTRFGSSPN
1501: YNSSATCISS GLRPGPPDST RGSSALASRG STQVRTYGSQ NVNLDARYQP SNRVLPVPLH QRRADKSIRL GPQGDLGRGM SLCGKQPVSN DILPEVPLNS
1601: HHGQTSENSR DSSFTGVTSN PTSFRTSNTS WGMADLSSPV PSTIGQTHTS STVRKEMCAE AQTFPEEVLQ EKSILTIKEF YSAKDEKEVA LCMKELNAPS
1701: FYPSLVSLWI TDSFERKDLE RELLAKLLVY LCTAQEHLLS QRQLLQGFQH VLSTLEDAVT DAPKATKFLG QIFARVILED GISLTEVGGL LQERDGREEP
1801: AGHHALDDSL SSEVLGSMLE SIRVERGDNA VDEIRAKSNL QRPGVCV
0101: FGSLDNVKPS NVPAQSDVLS SVSAEGTWAA DSPTPTLQTK GYSSPPFTLQ FGTFSPGVIN KQETTSCTSS GPPDLNGNKH EKACHGLHYN PNTVSSSPIQ
0201: ELQKQEARDD LVIGGETDLI GKYKNVHVPE LHETQTMLNS VPPTSKVCTD SCKVLLRTMS SPTQQQCQNQ EETKNTVSAN QTDTAYKYPA TKPKISVQIP
0301: ASYTPNMAPP QFMLPVPGRS MPVAFQQKQP QVPIEFRGPG FQMQSIGSVS GSLPVKMAVP LGNSPHIQPM FVHGAQPRAF HQQSFIHHGQ GFGCAPPANC
0401: HLPQFGNMRI AQELSQQHPR SSDEQKRTIK ITHPETHEEL MLDRRGHSFI GVPASGQIPL NNINQLPHSV QTFSPLQKVY YPRPGTYNSA PIYLPNSTAV
0501: PLASRQISSK IQPPMHGFDS TNSNQPITSI RPPMPTSWLD ATSRPLTNLH TASEISNFKG MLPSSLPAPV HVELKPPITL PAEKNSESTI SNQQNYRKIG
0601: PEMSPEPVDL VYEGSNKDSV ATCDISCNLI SQAVSTQQAQ TRPASADHAT PAVGPQTILT SNLPLESTAC CKSSVKAKPI EVEESLVVPT TFSSHAKLES
0701: SHTEASGRTA SVILTATSLV SKIDGTSPTN RNYKYHGNSI LGKPPLIYAQ EMVSPKFAGS NTSPEGLGKA KVNPVPFQEK FSSELNDLVP LQNHDFMIEE
0801: HVPDEKGMCS ESKTEQVDVT APGTAFGLED DTSVAKSGRF HACHQSVDLH PSIYIGGIQT SNDSQQPSSD AEIITSQSEN KQNNSRVDSA RDVKNAAPIS
0901: TSAISQRKTE QERIDSEISN PCSTTAASVV QTKKVVLEST KAKSINGRRK KRKETLPKGS GQKYYDLDSA PSSLNENVES FVTSEDVQCS LNCTWDAEKD
1001: NSTGGNDCQN RSDLFSWEDT AENSAEKLKV LGGTHSKSGA EVNKDKSEFE HKKYSRDFLL TFAQSCIELP AGFMIGLDIS EAVMSVHVGA PFIDNTQLNP
1101: NHARIKDRGS RANRHVAGKF DDDKWRKQFG SPVSGRNQLS DNVHQPAFSN WDAVQHVGNG SVRSISQSQP FSQYSGEMLS RAMKEVVSQR SMSRGSVDER
1201: WQHRTNAQGI SSPSQVSMPV MHKAEKKYEI GKVSDEEGSK QRQLKAILNK LTPQNFEKLF AQVKELNIDN VVTLTGVISQ IFDKALMEPT FCEMYASFCF
1301: RLAGDLPNFV KDDEKITFKR LLLNKCQEEF ERGEREQAEA DKAEEEGGAK QSEGEREEKR IRARRRMLGN IRLIGELYKK KMLTERIMHE CINKLLGEYQ
1401: NPDEEDLEAL CKLMSTIGEM IDHPRAKVHM DFYFDLIQKL SENVKLSSRI RFMLEDVIDL RKNKWRQRRK VEGPKKIEEV RRDAVKQKFG QSTRFGSSPN
1501: YNSSATCISS GLRPGPPDST RGSSALASRG STQVRTYGSQ NVNLDARYQP SNRVLPVPLH QRRADKSIRL GPQGDLGRGM SLCGKQPVSN DILPEVPLNS
1601: HHGQTSENSR DSSFTGVTSN PTSFRTSNTS WGMADLSSPV PSTIGQTHTS STVRKEMCAE AQTFPEEVLQ EKSILTIKEF YSAKDEKEVA LCMKELNAPS
1701: FYPSLVSLWI TDSFERKDLE RELLAKLLVY LCTAQEHLLS QRQLLQGFQH VLSTLEDAVT DAPKATKFLG QIFARVILED GISLTEVGGL LQERDGREEP
1801: AGHHALDDSL SSEVLGSMLE SIRVERGDNA VDEIRAKSNL QRPGVCV
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQVTGEPGV GGPTNPTESF NRNTGPIPKA PTSQSTVMSS KINETPNTAK VAASGDASQA FPLQFGSLGP DLMVPARTTS APPNMDDQKR AQMQQSSLRT
0201: ASNVPASVPK KDSSNKGADN QLMRKEGHNP SSEKADIQVP HIAPPSQTQK SPITNIRMPS VQTPYQHTQV PHPVHFGGPN MHMQTPVTAT SFQMPMPMAL
0301: SMGNTPQIPP QVFYQGHPPH PMHHQGMMHQ AQGHGFATPM GAQIHPQLGH VGVGLSPQYP QQQGGKYGGA RKTTPVKITH PDTHEELRLD RRGDPYSEGD
0401: STALKPHSNP PPRSQPVSSF APRPVNLVQP SYNSNTMIYP PVSVPLNNGP MSSAQAPRYH YPVIDGSQRV QLINQPAHTA PQLIRPAAPA HLSSDSTSSV
0501: KARNAQNVMS SALPVNAKVS VKPAGVSEKL GSPKDRSHGE VNISLSQKNV EACSLSSSQQ PKPSFVSGVP NSSAPPAKSP VETVPLAKSS VETVPPVKSS
0601: VETAPVTTTE IRRAEMVSES ISVEDQTCKV EPPHNLTENR GQTMPDSLVS DPETATVAAK ENLSLPATNG FRKQLLKVST TSDAPTSDSV DTSIDKSTEG
0701: SSHASSEISG SSPQEKDLKC DNRTASDKLD ERSVISDAKH ETLSGVLEKA QNEVDGATDV CPVSEKLAVT DDTSSDLPHS THVLSSTVPL GHSETHKSAV
0801: ETNTRRNTST KGKKKIKEIL QKADAAGTTS DLYMAYKGPE EKKESSNVVH DVSNQNLLPA IPQAVEAIVD TEPVKNEPED WEDAADVSTP KLETADNSVN
0901: AKRGSSDEVS DNCINTEKKY SRDFLLKFAD LCTALPEGFD VSPDIANALI VAYMGASHHE HDSYPTPGKV MDRQASGARL DRRPSNVAGD DRWTKNQGSL
1001: PAGYGGNVGF RPGQGGNSGV LRNPRMQGPI ISRPMQPVGP MGGMGRNTPD LERWQRGSNF QQKGLFPSPH TPMQVMHKAE RKYQVGTIAD EEQAKQRQLK
1101: SILNKLTPQN FEKLFEQVKS VNIDNAVTLS GVISQIFDKA LMEPTFCEMY ADFCFHLSGA LPDFNENGEK ITFKRLLLNK CQEEFERGEK EEEEASRVAE
1201: EGQVEQTEEE REEKRLQVRR RMLGNIRLIG ELYKKRMLTE KIMHACIQKL LGYNQDPHEE NIEALCKLMS TIGVMIDHNK AKFQMDGYFE KMKMLSCKQE
1301: LSSRVRFMLI NAIDLRKNKW QERMKVEGPK KIEEVHRDAA QERQTQANRL SRGPSMNSSG RRGHMEFSSP RGGGGMLSPP AAQMGSYHGP PQGRGFSNQD
1401: IRFDDRPSYE PRMVPMPQRS VCEEPITLGP QGGLGQGMSI RRPAVASNTY QSDATQAGGG DSRRPAGGLN GFGSHRPASP VTHGRSSPQE RGTAYVHREF
1501: ASLSRASDLS PEVSSARQVL QGPSATVNSP RENALSEEQL ENLSLSAIKE YYSARDENEI GMCMKDMNSP AYHPTMISLW VTDSFERKDK ERDLLAKLLV
1601: NLVKSADNAL NEVQLVKGFE SVLKTLEDAV NDAPKAAEFL GRIFGKSVTE KVVTLTEIGR LIQEGGEEPG SLIEFGLGGD VLGSVLEMIK TEAGEETLVE
1701: IRRSSGLRIE NFKPHAPNRS KILEKFT
0101: RSQVTGEPGV GGPTNPTESF NRNTGPIPKA PTSQSTVMSS KINETPNTAK VAASGDASQA FPLQFGSLGP DLMVPARTTS APPNMDDQKR AQMQQSSLRT
0201: ASNVPASVPK KDSSNKGADN QLMRKEGHNP SSEKADIQVP HIAPPSQTQK SPITNIRMPS VQTPYQHTQV PHPVHFGGPN MHMQTPVTAT SFQMPMPMAL
0301: SMGNTPQIPP QVFYQGHPPH PMHHQGMMHQ AQGHGFATPM GAQIHPQLGH VGVGLSPQYP QQQGGKYGGA RKTTPVKITH PDTHEELRLD RRGDPYSEGD
0401: STALKPHSNP PPRSQPVSSF APRPVNLVQP SYNSNTMIYP PVSVPLNNGP MSSAQAPRYH YPVIDGSQRV QLINQPAHTA PQLIRPAAPA HLSSDSTSSV
0501: KARNAQNVMS SALPVNAKVS VKPAGVSEKL GSPKDRSHGE VNISLSQKNV EACSLSSSQQ PKPSFVSGVP NSSAPPAKSP VETVPLAKSS VETVPPVKSS
0601: VETAPVTTTE IRRAEMVSES ISVEDQTCKV EPPHNLTENR GQTMPDSLVS DPETATVAAK ENLSLPATNG FRKQLLKVST TSDAPTSDSV DTSIDKSTEG
0701: SSHASSEISG SSPQEKDLKC DNRTASDKLD ERSVISDAKH ETLSGVLEKA QNEVDGATDV CPVSEKLAVT DDTSSDLPHS THVLSSTVPL GHSETHKSAV
0801: ETNTRRNTST KGKKKIKEIL QKADAAGTTS DLYMAYKGPE EKKESSNVVH DVSNQNLLPA IPQAVEAIVD TEPVKNEPED WEDAADVSTP KLETADNSVN
0901: AKRGSSDEVS DNCINTEKKY SRDFLLKFAD LCTALPEGFD VSPDIANALI VAYMGASHHE HDSYPTPGKV MDRQASGARL DRRPSNVAGD DRWTKNQGSL
1001: PAGYGGNVGF RPGQGGNSGV LRNPRMQGPI ISRPMQPVGP MGGMGRNTPD LERWQRGSNF QQKGLFPSPH TPMQVMHKAE RKYQVGTIAD EEQAKQRQLK
1101: SILNKLTPQN FEKLFEQVKS VNIDNAVTLS GVISQIFDKA LMEPTFCEMY ADFCFHLSGA LPDFNENGEK ITFKRLLLNK CQEEFERGEK EEEEASRVAE
1201: EGQVEQTEEE REEKRLQVRR RMLGNIRLIG ELYKKRMLTE KIMHACIQKL LGYNQDPHEE NIEALCKLMS TIGVMIDHNK AKFQMDGYFE KMKMLSCKQE
1301: LSSRVRFMLI NAIDLRKNKW QERMKVEGPK KIEEVHRDAA QERQTQANRL SRGPSMNSSG RRGHMEFSSP RGGGGMLSPP AAQMGSYHGP PQGRGFSNQD
1401: IRFDDRPSYE PRMVPMPQRS VCEEPITLGP QGGLGQGMSI RRPAVASNTY QSDATQAGGG DSRRPAGGLN GFGSHRPASP VTHGRSSPQE RGTAYVHREF
1501: ASLSRASDLS PEVSSARQVL QGPSATVNSP RENALSEEQL ENLSLSAIKE YYSARDENEI GMCMKDMNSP AYHPTMISLW VTDSFERKDK ERDLLAKLLV
1601: NLVKSADNAL NEVQLVKGFE SVLKTLEDAV NDAPKAAEFL GRIFGKSVTE KVVTLTEIGR LIQEGGEEPG SLIEFGLGGD VLGSVLEMIK TEAGEETLVE
1701: IRRSSGLRIE NFKPHAPNRS KILEKFT
Arabidopsis Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.