Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89056 | Canola | cytosol | 29.13 | 85.69 |
| CDY42674 | Canola | plastid | 71.8 | 78.09 |
| Bra014505.1-P | Field mustard | cytosol | 74.0 | 77.17 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 21.66 | 56.84 |
| GSMUA_Achr11P... | Banana | cytosol | 10.31 | 53.78 |
| KRH66436 | Soybean | endoplasmic reticulum | 44.01 | 45.56 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 44.99 | 45.39 |
| KRH48862 | Soybean | nucleus | 43.83 | 45.22 |
| PGSC0003DMT400004663 | Potato | nucleus | 20.73 | 43.24 |
| KRH75579 | Soybean | endoplasmic reticulum | 44.01 | 41.71 |
| KRH46542 | Soybean | nucleus | 44.35 | 41.7 |
| GSMUA_Achr11P... | Banana | nucleus | 37.64 | 39.25 |
| GSMUA_Achr11P... | Banana | nucleus | 36.31 | 39.02 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 39.61 | 35.19 |
| AT1G62410.1 | Thale cress | cytosol | 4.46 | 34.53 |
| TraesCS2A01G209100.1 | Wheat | nucleus | 36.36 | 33.48 |
| TraesCS2B01G235100.1 | Wheat | golgi | 36.19 | 33.33 |
| TraesCS2D01G215300.1 | Wheat | nucleus | 36.13 | 33.32 |
| HORVU2Hr1G041760.1 | Barley | nucleus | 34.92 | 33.04 |
| HORVU2Hr1G041770.2 | Barley | nucleus | 34.8 | 32.14 |
| Solyc08g077700.2.1 | Tomato | nucleus | 29.94 | 31.37 |
| Zm00001d021741_P001 | Maize | nucleus | 32.48 | 30.81 |
| KXG36457 | Sorghum | cytosol | 32.31 | 30.48 |
| TraesCS2B01G408800.1 | Wheat | nucleus | 30.92 | 29.93 |
| TraesCS2D01G388100.1 | Wheat | nucleus | 30.86 | 29.93 |
| TraesCS2A01G390600.1 | Wheat | nucleus, plastid | 30.8 | 29.85 |
| Zm00001d006573_P002 | Maize | cytosol | 31.62 | 29.75 |
| HORVU2Hr1G092940.7 | Barley | nucleus | 30.28 | 29.33 |
| KXG26815 | Sorghum | nucleus | 30.8 | 28.8 |
| Zm00001d025979_P007 | Maize | nucleus | 30.28 | 28.74 |
| AT2G24050.1 | Thale cress | plastid | 11.29 | 26.1 |
| AT5G57870.1 | Thale cress | plastid | 10.65 | 23.59 |
| AT4G30680.1 | Thale cress | mitochondrion, plastid | 3.24 | 21.29 |
| Os07t0555200-01 | Rice | nucleus, plastid | 13.67 | 18.21 |
Protein Annotations
| Gene3D:1.25.40.180 | MapMan:17.4.2.3.2 | EntrezGene:825194 | ProteinID:AAF73054.1 | EMBL:AB107249 | ProteinID:AEE80027.1 |
| ProteinID:AEE80028.1 | EMBL:AF263834 | EMBL:AK226781 | InterPro:ARM-type_fold | ArrayExpress:AT3G60240 | EnsemblPlantsGene:AT3G60240 |
| RefSeq:AT3G60240 | TAIR:AT3G60240 | RefSeq:AT3G60240-TAIR-G | EnsemblPlants:AT3G60240.4 | TAIR:AT3G60240.4 | Unigene:At.46412 |
| ProteinID:CAB87861.1 | ncoils:Coil | Symbol:EIF4G | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003729 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0006417 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR003891 | InterPro:IPR016021 | InterPro:Initiation_fac_eIF4g_MI | InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 | RefSeq:NP_001078318.1 |
| RefSeq:NP_001078319.1 | PFAM:PF02847 | PFAM:PF02854 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51366 |
| PANTHER:PTHR23253 | PANTHER:PTHR23253:SF9 | UniProt:Q76E23 | SMART:SM00543 | SMART:SM00544 | SUPFAM:SSF48371 |
| SUPFAM:SSF81995 | UniParc:UPI000150554D | SEG:seg | : | : | : |
Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
Coordinates
chr3:+:22261650..22268445
Molecular Weight (calculated)
187932.0 Da
IEP (calculated)
7.772
GRAVY (calculated)
-0.739
Length
1727 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQVTGEPGV GGPTNPTESF NRNTGPIPKA PTSQSTVMSS KINETPNTAK VAASGDASQA FPLQFGSLGP DLMVPARTTS APPNMDDQKR AQMQQSSLRT
0201: ASNVPASVPK KDSSNKGADN QLMRKEGHNP SSEKADIQVP HIAPPSQTQK SPITNIRMPS VQTPYQHTQV PHPVHFGGPN MHMQTPVTAT SFQMPMPMAL
0301: SMGNTPQIPP QVFYQGHPPH PMHHQGMMHQ AQGHGFATPM GAQIHPQLGH VGVGLSPQYP QQQGGKYGGA RKTTPVKITH PDTHEELRLD RRGDPYSEGD
0401: STALKPHSNP PPRSQPVSSF APRPVNLVQP SYNSNTMIYP PVSVPLNNGP MSSAQAPRYH YPVIDGSQRV QLINQPAHTA PQLIRPAAPA HLSSDSTSSV
0501: KARNAQNVMS SALPVNAKVS VKPAGVSEKL GSPKDRSHGE VNISLSQKNV EACSLSSSQQ PKPSFVSGVP NSSAPPAKSP VETVPLAKSS VETVPPVKSS
0601: VETAPVTTTE IRRAEMVSES ISVEDQTCKV EPPHNLTENR GQTMPDSLVS DPETATVAAK ENLSLPATNG FRKQLLKVST TSDAPTSDSV DTSIDKSTEG
0701: SSHASSEISG SSPQEKDLKC DNRTASDKLD ERSVISDAKH ETLSGVLEKA QNEVDGATDV CPVSEKLAVT DDTSSDLPHS THVLSSTVPL GHSETHKSAV
0801: ETNTRRNTST KGKKKIKEIL QKADAAGTTS DLYMAYKGPE EKKESSNVVH DVSNQNLLPA IPQAVEAIVD TEPVKNEPED WEDAADVSTP KLETADNSVN
0901: AKRGSSDEVS DNCINTEKKY SRDFLLKFAD LCTALPEGFD VSPDIANALI VAYMGASHHE HDSYPTPGKV MDRQASGARL DRRPSNVAGD DRWTKNQGSL
1001: PAGYGGNVGF RPGQGGNSGV LRNPRMQGPI ISRPMQPVGP MGGMGRNTPD LERWQRGSNF QQKGLFPSPH TPMQVMHKAE RKYQVGTIAD EEQAKQRQLK
1101: SILNKLTPQN FEKLFEQVKS VNIDNAVTLS GVISQIFDKA LMEPTFCEMY ADFCFHLSGA LPDFNENGEK ITFKRLLLNK CQEEFERGEK EEEEASRVAE
1201: EGQVEQTEEE REEKRLQVRR RMLGNIRLIG ELYKKRMLTE KIMHACIQKL LGYNQDPHEE NIEALCKLMS TIGVMIDHNK AKFQMDGYFE KMKMLSCKQE
1301: LSSRVRFMLI NAIDLRKNKW QERMKVEGPK KIEEVHRDAA QERQTQANRL SRGPSMNSSG RRGHMEFSSP RGGGGMLSPP AAQMGSYHGP PQGRGFSNQD
1401: IRFDDRPSYE PRMVPMPQRS VCEEPITLGP QGGLGQGMSI RRPAVASNTY QSDATQAGGG DSRRPAGGLN GFGSHRPASP VTHGRSSPQE RGTAYVHREF
1501: ASLSRASDLS PEVSSARQVL QGPSATVNSP RENALSEEQL ENLSLSAIKE YYSARDENEI GMCMKDMNSP AYHPTMISLW VTDSFERKDK ERDLLAKLLV
1601: NLVKSADNAL NEVQLVKGFE SVLKTLEDAV NDAPKAAEFL GRIFGKSVTE KVVTLTEIGR LIQEGGEEPG SLIEFGLGGD VLGSVLEMIK TEAGEETLVE
1701: IRRSSGLRIE NFKPHAPNRS KILEKFT
0101: RSQVTGEPGV GGPTNPTESF NRNTGPIPKA PTSQSTVMSS KINETPNTAK VAASGDASQA FPLQFGSLGP DLMVPARTTS APPNMDDQKR AQMQQSSLRT
0201: ASNVPASVPK KDSSNKGADN QLMRKEGHNP SSEKADIQVP HIAPPSQTQK SPITNIRMPS VQTPYQHTQV PHPVHFGGPN MHMQTPVTAT SFQMPMPMAL
0301: SMGNTPQIPP QVFYQGHPPH PMHHQGMMHQ AQGHGFATPM GAQIHPQLGH VGVGLSPQYP QQQGGKYGGA RKTTPVKITH PDTHEELRLD RRGDPYSEGD
0401: STALKPHSNP PPRSQPVSSF APRPVNLVQP SYNSNTMIYP PVSVPLNNGP MSSAQAPRYH YPVIDGSQRV QLINQPAHTA PQLIRPAAPA HLSSDSTSSV
0501: KARNAQNVMS SALPVNAKVS VKPAGVSEKL GSPKDRSHGE VNISLSQKNV EACSLSSSQQ PKPSFVSGVP NSSAPPAKSP VETVPLAKSS VETVPPVKSS
0601: VETAPVTTTE IRRAEMVSES ISVEDQTCKV EPPHNLTENR GQTMPDSLVS DPETATVAAK ENLSLPATNG FRKQLLKVST TSDAPTSDSV DTSIDKSTEG
0701: SSHASSEISG SSPQEKDLKC DNRTASDKLD ERSVISDAKH ETLSGVLEKA QNEVDGATDV CPVSEKLAVT DDTSSDLPHS THVLSSTVPL GHSETHKSAV
0801: ETNTRRNTST KGKKKIKEIL QKADAAGTTS DLYMAYKGPE EKKESSNVVH DVSNQNLLPA IPQAVEAIVD TEPVKNEPED WEDAADVSTP KLETADNSVN
0901: AKRGSSDEVS DNCINTEKKY SRDFLLKFAD LCTALPEGFD VSPDIANALI VAYMGASHHE HDSYPTPGKV MDRQASGARL DRRPSNVAGD DRWTKNQGSL
1001: PAGYGGNVGF RPGQGGNSGV LRNPRMQGPI ISRPMQPVGP MGGMGRNTPD LERWQRGSNF QQKGLFPSPH TPMQVMHKAE RKYQVGTIAD EEQAKQRQLK
1101: SILNKLTPQN FEKLFEQVKS VNIDNAVTLS GVISQIFDKA LMEPTFCEMY ADFCFHLSGA LPDFNENGEK ITFKRLLLNK CQEEFERGEK EEEEASRVAE
1201: EGQVEQTEEE REEKRLQVRR RMLGNIRLIG ELYKKRMLTE KIMHACIQKL LGYNQDPHEE NIEALCKLMS TIGVMIDHNK AKFQMDGYFE KMKMLSCKQE
1301: LSSRVRFMLI NAIDLRKNKW QERMKVEGPK KIEEVHRDAA QERQTQANRL SRGPSMNSSG RRGHMEFSSP RGGGGMLSPP AAQMGSYHGP PQGRGFSNQD
1401: IRFDDRPSYE PRMVPMPQRS VCEEPITLGP QGGLGQGMSI RRPAVASNTY QSDATQAGGG DSRRPAGGLN GFGSHRPASP VTHGRSSPQE RGTAYVHREF
1501: ASLSRASDLS PEVSSARQVL QGPSATVNSP RENALSEEQL ENLSLSAIKE YYSARDENEI GMCMKDMNSP AYHPTMISLW VTDSFERKDK ERDLLAKLLV
1601: NLVKSADNAL NEVQLVKGFE SVLKTLEDAV NDAPKAAEFL GRIFGKSVTE KVVTLTEIGR LIQEGGEEPG SLIEFGLGGD VLGSVLEMIK TEAGEETLVE
1701: IRRSSGLRIE NFKPHAPNRS KILEKFT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.