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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P06000_001 Banana cytosol 3.61 65.85
AT4G30680.1 Thale cress mitochondrion, plastid 20.62 58.56
GSMUA_Achr4P05990_001 Banana cytosol 11.24 57.14
VIT_11s0037g00490.t01 Wine grape plastid 58.77 55.29
AT5G57870.1 Thale cress plastid 57.43 55.0
KRH72326 Soybean endoplasmic reticulum 57.56 54.85
KRH03030 Soybean endoplasmic reticulum 57.7 54.63
Solyc07g005810.2.1 Tomato plastid 56.22 54.33
KRH63081 Soybean endoplasmic reticulum 55.69 53.75
KRH55033 Soybean endoplasmic reticulum 55.42 53.42
PGSC0003DMT400029102 Potato cytosol, plastid 55.42 53.08
PGSC0003DMT400020464 Potato cytosol 54.89 53.04
Solyc12g009960.1.1 Tomato nucleus 54.35 52.52
EES12452 Sorghum cytosol 55.29 52.21
HORVU2Hr1G086240.1 Barley cytosol 51.94 51.53
Zm00001d025777_P007 Maize plastid 54.08 51.47
Zm00001d003147_P001 Maize plastid 53.95 51.27
TraesCS2D01G353600.1 Wheat cytosol, golgi, nucleus 53.41 50.63
TraesCS2A01G354900.1 Wheat cytosol 53.55 50.63
TraesCS2B01G373600.1 Wheat cytosol 53.41 50.57
GSMUA_Achr9P22750_001 Banana plastid 50.33 50.54
GSMUA_AchrUn_... Banana cytosol 50.47 50.54
Os02t0611500-01 Rice cytosol 51.27 49.1
Os04t0499300-01 Rice plastid 51.54 47.77
VIT_04s0008g06770.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, nucleus 54.75 46.32
GSMUA_Achr3P28040_001 Banana cytosol 26.37 43.68
AT1G62410.1 Thale cress cytosol 12.45 41.7
Solyc07g005780.1.1 Tomato cytosol 23.83 39.56
GSMUA_Achr4P05970_001 Banana cytosol 7.9 39.07
HORVU6Hr1G023180.1 Barley cytosol 15.13 38.31
GSMUA_Achr4P12750_001 Banana cytosol 52.88 34.05
Os06t0520600-01 Rice extracellular 18.61 19.55
AT3G60240.4 Thale cress cytosol 26.1 11.29
Protein Annotations
Gene3D:1.25.40.180MapMan:17.4.2.4.2EntrezGene:816939UniProt:A0A178VPM7ProteinID:AAC63673.1ProteinID:AEC07523.1
InterPro:ARM-type_foldArrayExpress:AT2G24050EnsemblPlantsGene:AT2G24050RefSeq:AT2G24050TAIR:AT2G24050RefSeq:AT2G24050-TAIR-G
EnsemblPlants:AT2G24050.1TAIR:AT2G24050.1EMBL:AY062494Unigene:At.12924EMBL:BT002087GO:GO:0003674
GO:GO:0003676GO:GO:0003723GO:GO:0003743GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006412GO:GO:0006413
GO:GO:0006417GO:GO:0008135GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0019538InterPro:IPR003891InterPro:IPR016021InterPro:Initiation_fac_eIF4g_MIInterPro:MIF4-like_sfInterPro:MIF4G-like_typ-3
RefSeq:NP_179983.1UniProt:O82233ProteinID:OAP07381.1PFAM:PF02847PFAM:PF02854PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103
PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005
PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030
PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PFscan:PS51366
PANTHER:PTHR23253PANTHER:PTHR23253:SF32SMART:SM00543SMART:SM00544SUPFAM:SSF48371UniParc:UPI00000AAC59
Symbol:eIFiso4G2SEG:seg::::
Description
EIF(ISO)4G2Eukaryotic translation initiation factor isoform 4G-2 [Source:UniProtKB/Swiss-Prot;Acc:O82233]
Coordinates
chr2:-:10225225..10228698
Molecular Weight (calculated)
82894.6 Da
IEP (calculated)
7.740
GRAVY (calculated)
-0.537
Length
747 amino acids
Sequence
(BLAST)
001: MQQQGEPSVL SLRPGGGGGK SRLFVPRFSS SSSFDLTNGG SEETPFPVKR ENSGERVRFS REEILQHRES VQVSDEILRR CKEIAVELFG EEQSWGNHAA
101: ESKITNHTQH RHTETDNRDW HSRSQIPTSG KEWLRDDPRE AKSTWQGSGP TPVLIKAEVP WSAKRGALSD KDRVVKSVKG ILNKLTPEKY ELLKGQLIDA
201: GITSADILKE VIQLIFENAI LQPTFCEMYA LLCFDINGQL PSFPSEEPGG KEITFKRVLL NNCQEAFEGA GKLKEEIRQM TNPDQEMERM DKEKMAKLRT
301: LGNIRLIGEL LKQKMVPEKI VHHIVQELLG DDTKACPAEG DVEALCQFFI TIGKQLDDSP RSRGINDTYF GRLKELARHP QLELRLRFMV QNVVDLRANK
401: WVPRREEVKA KKINEIHSEA ERNLGMRPGA MASMRNNNNN RAAVSGAADG MGLGNILGRP GTGGMMPGMP GTRVMPMDED GWEMARTRSM PRGNRQTVQQ
501: PRFQPPPAIN KSLSVNSRLL PQGSGGLLNG GGRPSPLLQG NGSSSAPQAS KPIPTVEKPQ PRSQPQPQPQ AAPLANSLNA GELERKTKSL LEEYFSIRLV
601: DEALQCVEEL KSPSYHPELV KETISLGLEK NPPLVEPIAK LLKHLISKNV LTSKDLGAGC LLYGSMLDDI GIDLPKAPNS FGEFLGELVS AKVLDFELVR
701: DVLKKMEDEW FRKTVLNAVI KSVRECPSGQ SVLDSQAVEV EACQSLL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.