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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 4
  • cytosol 3
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc07g005810.2.1 Tomato plastid 71.16 73.09
KRH55033 Soybean endoplasmic reticulum 70.65 72.39
PGSC0003DMT400020464 Potato cytosol 70.4 72.32
KRH63081 Soybean endoplasmic reticulum 70.15 71.96
PGSC0003DMT400029102 Potato cytosol, plastid 70.65 71.92
Solyc12g009960.1.1 Tomato nucleus 69.9 71.8
GSMUA_Achr4P06000_001 Banana cytosol 3.65 70.73
KRH03030 Soybean endoplasmic reticulum 69.27 69.71
KRH72326 Soybean endoplasmic reticulum 68.39 69.26
VIT_04s0008g06770.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, nucleus 76.32 68.63
GSMUA_Achr4P05990_001 Banana cytosol 12.22 65.99
AT5G57870.1 Thale cress plastid 64.74 65.9
CDY28203 Canola cytosol 41.94 65.17
CDY32742 Canola plastid 62.85 64.81
Bra020407.1-P Field mustard plastid 62.72 64.68
GSMUA_Achr9P22750_001 Banana plastid 60.33 64.38
CDY69274 Canola cytosol, mitochondrion 26.45 64.22
CDY02774 Canola plastid 62.34 64.12
Bra011218.1-P Field mustard plastid 43.95 63.8
GSMUA_AchrUn_... Banana cytosol 59.7 63.54
CDY39236 Canola cytosol 58.56 62.92
EES12452 Sorghum cytosol 62.47 62.71
Bra024051.1-P Field mustard cytosol 58.94 62.57
Zm00001d003147_P001 Maize plastid 61.71 62.34
CDX72262 Canola cytosol 58.31 62.06
Zm00001d025777_P007 Maize plastid 61.34 62.04
CDY28211 Canola mitochondrion 36.52 61.44
CDX68687 Canola plastid 57.56 61.1
HORVU2Hr1G086240.1 Barley cytosol 57.93 61.09
Os02t0611500-01 Rice cytosol 59.82 60.9
Bra011211.1-P Field mustard plastid 57.43 60.88
TraesCS2A01G354900.1 Wheat cytosol 60.08 60.38
TraesCS2B01G373600.1 Wheat cytosol 59.82 60.2
TraesCS2D01G353600.1 Wheat cytosol, golgi, nucleus 59.7 60.15
Os04t0499300-01 Rice plastid 60.33 59.43
AT2G24050.1 Thale cress plastid 55.29 58.77
AT4G30680.1 Thale cress mitochondrion, plastid 17.76 53.61
GSMUA_Achr3P28040_001 Banana cytosol 27.96 49.22
Solyc07g005780.1.1 Tomato cytosol 27.71 48.89
AT1G62410.1 Thale cress cytosol 12.85 45.74
GSMUA_Achr4P05970_001 Banana cytosol 8.44 44.37
GSMUA_Achr4P12750_001 Banana cytosol 64.48 44.14
HORVU6Hr1G023180.1 Barley cytosol 15.24 41.02
Os06t0520600-01 Rice extracellular 19.65 21.94
VIT_15s0021g00980.t01 Wine grape nucleus 23.05 10.69
Protein Annotations
Gene3D:1.25.40.180EntrezGene:100260481wikigene:100260481MapMan:17.4.2.4.2EMBL:AM471193InterPro:ARM-type_fold
ProteinID:CAN70546ProteinID:CAN70546.1ProteinID:CCB59769ProteinID:CCB59769.1UniProt:F6HYK5EMBL:FN596499
GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0005488GO:GO:0005515InterPro:IPR003891
InterPro:IPR016021InterPro:Initiation_fac_eIF4g_MIEntrezGene:LOC100260481wikigene:LOC100260481InterPro:MIF4-like_sfInterPro:MIF4G-like_typ-3
PFAM:PF02847PFAM:PF02854PFscan:PS51366PANTHER:PTHR23253PANTHER:PTHR23253:SF32SMART:SM00543
SMART:SM00544SUPFAM:SSF48371TIGR:TC57539TIGR:TC66217UniParc:UPI00015C9A24ArrayExpress:VIT_11s0037g00490
EnsemblPlantsGene:VIT_11s0037g00490EnsemblPlants:VIT_11s0037g00490.t01unigene:Vvi.1339RefSeq:XP_002277218RefSeq:XP_002277218.2RefSeq:XP_003633181
RefSeq:XP_003633181.1SEG:seg::::
Description
No Description!
Coordinates
chr11:-:8303115..8313095
Molecular Weight (calculated)
87000.6 Da
IEP (calculated)
8.309
GRAVY (calculated)
-0.403
Length
794 amino acids
Sequence
(BLAST)
001: MQADQTVLSL RPGGGGGGGG GANRGSRFLG PRFDSSSSSP FGSSSDLPVL RPHGGAPSSF SIKAGDSRFE GRERVRFTRD KLLQLREVVD VPEDILKIKQ
101: EIEAELFGED QNWGRGESNL PNQSQSRYSE PDNRDWRGRS AQLPASGEER SWFDSRQQEA NQFNRQDQLN SQFAKAQISS VLGGPAPALV KAEVPWSARR
201: VNLSEKERVL KTVKGILNKL TPEKFDLLKG QLIDSGITTA DILKGVISLI FDKAVLEPTF CPMYALLCSD LNEKLPPFPS DEPGGKEITF KRVLLNNCQE
301: AFEGSDKLRA EIRQMTAPEQ ELERRDKERM VKLRTLGNIR LIGELLKQKM VPEKIVHHIV QELLGHDNKS CPDEENVEAI CQFFNTIGKQ LDESTKSRRI
401: NDMYFSRLKE LTTNPQLAPR LRFMVRDVLD LRANSWVPRR EEVKAKTITE IHTEAEKNLG LRPGATASIR NSRNIVSGAQ GTMGPGGFPI TRPGSGGMMP
501: GMPGTRKMPG MPGIDNDNWE VPRTRAMPRG DGSGVQTRVQ QTHVQSPLMG KSMPLNSRLL PQGSAGFISG RTSALLQGSG PPPARTANFG LGMEPALQSP
601: VPAKSVPVAS IVPAAEKPVT PAARLNSDDL RRKTVSLLEE YFGVRILDEA LQCVEELKSP AYHPEVVKEA ISLALEKSPP CVDPVAKLLE FLFSKKVLTT
701: MDIGTGCLMY GSMLDDIGID LPKAPNSFGE VIGNLVLAGA LDFKVVTEIM KKVEDDRFQK MIFDAVMRIV SSSPSGQGVL DSQAADIAAC QSLL
Best Arabidopsis Sequence Match ( AT5G57870.2 )
(BLAST)
001: MQQGDQTVLS LRPGGGRGNR LFGSSSSSSS LSFGSLSSSD LPLLRPHGGA PASSFPFKGG DSRFDGRERV KYTREQLLEL KETTQLSDEI LRVQRETAAE
101: LFGEEGTWAR GESVVPVQSA SRFSEPDSRD WRSRSTQPPP SGEERSWDNL REAKDSRYVE ASQYNRQDQP NSQFSRANIS SNQGGGPAPV LVKAEVPWSA
201: RRGNLSENDR VLKTVKGILN KLTPEKYDLL KGQLIESGIT SADILKGVIT LIFDKAVLEP TFCPMYAKLC SDINDQLPTF PPAEPGDKEI TFKRVLLNIC
301: QEAFEGASQL REELRQMSAP DQEAERNDKE KLLKLKTLGN IRLIGELLKQ KMVPEKIVHH IVQELLGADE KVCPAEENVE AICHFFKTIG KQLDGNVKSK
401: RINDVYFKRL QALSKNPQLE LRLRFMVQNI IDMRSNGWVP RREEMKARTI TEIHTEAEKN LGLRPGATAN MRRGMVSSGG PVSPGPVYPG GRPGAGGLMP
501: GMPGTRRMPG MPGVDNDNWE VPRTRSMSRR DGPGPLHSPA VSKSASMNTR LLPQGSSGIM SGKTSALLQG SGSVSRPVTV SAERPAQSVA PLTVPVPVEK
601: PQPSGPKLSE EVLQRKTKSL LEEYFNVRLL GEALQCVEEL GLPSYHPEFV KEAISLSLEK SPPVVEPIAT LLEYLLSKKV VAPKDLETGF LLYGAMLDDI
701: GIDLPKAPNN FGEIVGKLIL AGGVDFKLVR EIIGKMEDDR FQKMVVDAAV RIVESSEQGK SLLASQAADI EACRNL
Arabidopsis Description
EIF(ISO)4G1Eukaryotic translation initiation factor isoform 4G-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZT6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.