Factsheet for Bra024051.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39236	Canola	cytosol	98.13	99.32
Bra011211.1-P	Field mustard	plastid	82.62	82.51
Bra011218.1-P	Field mustard	plastid	59.22	80.99
GSMUA_Achr4P06000_001	Banana	cytosol	3.48	63.41
AT4G30680.1	Thale cress	mitochondrion, plastid	21.93	62.36
GSMUA_Achr4P05990_001	Banana	cytosol	11.76	59.86
VIT_11s0037g00490.t01	Wine grape	plastid	62.57	58.94
KRH55033	Soybean	endoplasmic reticulum	60.03	57.94
Bra020407.1-P	Field mustard	plastid	59.63	57.92
KRH03030	Soybean	endoplasmic reticulum	60.83	57.67
KRH72326	Soybean	endoplasmic reticulum	60.43	57.65
KRH63081	Soybean	endoplasmic reticulum	59.09	57.11
Solyc07g005810.2.1	Tomato	plastid	58.42	56.53
PGSC0003DMT400020464	Potato	cytosol	58.29	56.4
PGSC0003DMT400029102	Potato	cytosol, plastid	58.16	55.77
Solyc12g009960.1.1	Tomato	nucleus	57.62	55.76
GSMUA_Achr9P22750_001	Banana	plastid	54.41	54.7
HORVU2Hr1G086240.1	Barley	cytosol	54.68	54.32
Zm00001d025777_P007	Maize	plastid	56.28	53.63
GSMUA_AchrUn_...	Banana	cytosol	53.21	53.35
EES12452	Sorghum	cytosol	56.42	53.35
TraesCS2D01G353600.1	Wheat	cytosol, golgi, nucleus	56.15	53.3
TraesCS2A01G354900.1	Wheat	cytosol	56.28	53.29
TraesCS2B01G373600.1	Wheat	cytosol	56.15	53.23
Zm00001d003147_P001	Maize	plastid	55.88	53.18
Os04t0499300-01	Rice	plastid	54.81	50.87
Os02t0611500-01	Rice	cytosol	52.54	50.38
VIT_04s0008g06770.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, nucleus	58.96	49.94
GSMUA_Achr3P28040_001	Banana	cytosol	27.27	45.23
GSMUA_Achr4P05970_001	Banana	cytosol	8.29	41.06
Solyc07g005780.1.1	Tomato	cytosol	23.8	39.56
HORVU6Hr1G023180.1	Barley	cytosol	15.11	38.31
GSMUA_Achr4P12750_001	Banana	cytosol	56.55	36.47
Os06t0520600-01	Rice	extracellular	18.98	19.97
Bra014505.1-P	Field mustard	cytosol	24.6	11.11

Protein Annotations

Gene3D:1.25.40.180	MapMan:17.4.2.4.2	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra024051	EnsemblPlants:Bra024051.1	EnsemblPlants:Bra024051.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	InterPro:IPR003891
InterPro:IPR016021	InterPro:Initiation_fac_eIF4g_MI	UniProt:M4E5J7	InterPro:MIF4-like_sf	InterPro:MIF4G-like_typ-3	PFAM:PF02847
PFAM:PF02854	PFscan:PS51366	PANTHER:PTHR23253	PANTHER:PTHR23253:SF32	SMART:SM00543	SMART:SM00544
SUPFAM:SSF48371	UniParc:UPI0002540E3A	SEG:seg	:	:	:

Description

AT2G24050 (E=2e-259) | MIF4G domain-containing protein / MA3 domain-containing protein

Coordinates

chrA03:-:27969090..27972136

Molecular Weight (calculated)

82511.2 Da

IEP (calculated)

8.140

GRAVY (calculated)

-0.532

Length

748 amino acids

Sequence
(BLAST)

001: MEQQGDRPVL SLRPGGGGRG GSRLFAHRPS SSSSDFTNGA DAPSFAVRRG EGHEILRFTR EQLLQLKEAI QVSEEILKLS REISADLFGE EQSWGRSETK
101: PAAQAQNRFS ETDNRDWHTR APAPSPSRER SREDQREPRD ARAGSGPPPV LVKAEVPWSA KRGTLSEKDQ VLKTVKGILN KMTPEKYDLL KGQLIDSGIT
201: SADILKGVIQ LIFEKAVLEP TFCQMYALLC FDINGKLPSF PSEEAGGKEI TFKRVLLNNC QEQFEGADKL KQEIRLMTDP EQEMDRRDKE RMLKLRTLGN
301: IRLIGELLKQ KMVPEKIVHH IVQELLGSDV KACPAEEDVE ALCQFFITIG KQLDESPRSR GTNDTYFLRL KELAMHPMLA PRLRFMVRNV IDLRADNWVP
401: RREEMKAKKI TEIHSEAERN LGLRPGAMAN MRNNNNRGGA DAGAADSGNF YGRSGTGGMM PGMPGARKMP GMPGARQMPG MPVTDDDGWE MARSRSMPRG
501: NRQNQQPAGR VQSPVIGKSP SVNSRLLPQG SGGLLAGRPS ALLQGSGAEQ TKPLPSPSKP AMEKPQSQAQ PQPQEAASPM ATTLDSEVLS RKTKSLLEEY
601: FNVRIMDEAL QCVEELKSPA YHPELVKEAI SLGLEKNPPC VEPVARLLEY LVSKKVLTTK DIGSGCLLYG SMLDDIGIDL PKAPNNFGEI LGSLVMANAS
701: DFETVEEILK KMEDDRFKKA VLDAVIKSVS ESLLAAQAAK IEACRSLV

Best Arabidopsis Sequence Match ( AT2G24050.1 )
(BLAST)

001: MQQQGEPSVL SLRPGGGGGK SRLFVPRFSS SSSFDLTNGG SEETPFPVKR ENSGERVRFS REEILQHRES VQVSDEILRR CKEIAVELFG EEQSWGNHAA
101: ESKITNHTQH RHTETDNRDW HSRSQIPTSG KEWLRDDPRE AKSTWQGSGP TPVLIKAEVP WSAKRGALSD KDRVVKSVKG ILNKLTPEKY ELLKGQLIDA
201: GITSADILKE VIQLIFENAI LQPTFCEMYA LLCFDINGQL PSFPSEEPGG KEITFKRVLL NNCQEAFEGA GKLKEEIRQM TNPDQEMERM DKEKMAKLRT
301: LGNIRLIGEL LKQKMVPEKI VHHIVQELLG DDTKACPAEG DVEALCQFFI TIGKQLDDSP RSRGINDTYF GRLKELARHP QLELRLRFMV QNVVDLRANK
401: WVPRREEVKA KKINEIHSEA ERNLGMRPGA MASMRNNNNN RAAVSGAADG MGLGNILGRP GTGGMMPGMP GTRVMPMDED GWEMARTRSM PRGNRQTVQQ
501: PRFQPPPAIN KSLSVNSRLL PQGSGGLLNG GGRPSPLLQG NGSSSAPQAS KPIPTVEKPQ PRSQPQPQPQ AAPLANSLNA GELERKTKSL LEEYFSIRLV
601: DEALQCVEEL KSPSYHPELV KETISLGLEK NPPLVEPIAK LLKHLISKNV LTSKDLGAGC LLYGSMLDDI GIDLPKAPNS FGEFLGELVS AKVLDFELVR
701: DVLKKMEDEW FRKTVLNAVI KSVRECPSGQ SVLDSQAVEV EACQSLL

Arabidopsis Description

EIF(ISO)4G2Eukaryotic translation initiation factor isoform 4G-2 [Source:UniProtKB/Swiss-Prot;Acc:O82233]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.