Factsheet for Bra011218.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011211.1-P	Field mustard	plastid	99.27	72.5
CDY28203	Canola	cytosol	66.0	70.65
CDY69274	Canola	cytosol, mitochondrion	40.04	66.97
AT4G30680.1	Thale cress	mitochondrion, plastid	30.71	63.88
CDY28211	Canola	mitochondrion	52.47	60.81
Bra024051.1-P	Field mustard	cytosol	80.99	59.22
GSMUA_Achr4P06000_001	Banana	cytosol	4.39	58.54
GSMUA_Achr4P05990_001	Banana	cytosol	15.17	56.46
VIT_11s0037g00490.t01	Wine grape	plastid	63.8	43.95
KRH03030	Soybean	endoplasmic reticulum	62.89	43.6
KRH72326	Soybean	endoplasmic reticulum	62.34	43.49
Bra020407.1-P	Field mustard	plastid	61.06	43.38
KRH55033	Soybean	endoplasmic reticulum	61.43	43.35
Solyc07g005810.2.1	Tomato	plastid	60.69	42.95
KRH63081	Soybean	endoplasmic reticulum	60.33	42.64
PGSC0003DMT400029102	Potato	cytosol, plastid	60.15	42.18
GSMUA_Achr9P22750_001	Banana	plastid	57.22	42.07
PGSC0003DMT400020464	Potato	cytosol	58.68	41.53
GSMUA_AchrUn_...	Banana	cytosol	56.31	41.29
Solyc12g009960.1.1	Tomato	nucleus	57.59	40.75
GSMUA_Achr4P05970_001	Banana	cytosol	11.15	40.4
GSMUA_Achr3P28040_001	Banana	cytosol	32.36	39.25
Zm00001d025777_P007	Maize	plastid	55.39	38.6
Zm00001d003147_P001	Maize	plastid	55.21	38.42
Os02t0611500-01	Rice	cytosol	54.11	37.95
EES12452	Sorghum	cytosol	54.84	37.93
VIT_04s0008g06770.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, nucleus	60.88	37.71
HORVU2Hr1G086240.1	Barley	cytosol	51.19	37.18
TraesCS2B01G373600.1	Wheat	cytosol	53.38	37.01
TraesCS2A01G354900.1	Wheat	cytosol	53.38	36.96
TraesCS2D01G353600.1	Wheat	cytosol, golgi, nucleus	53.2	36.93
Os04t0499300-01	Rice	plastid	53.2	36.1
HORVU6Hr1G023180.1	Barley	cytosol	18.65	34.58
Solyc07g005780.1.1	Tomato	cytosol	28.34	34.44
GSMUA_Achr4P12750_001	Banana	cytosol	55.76	26.29
Os06t0520600-01	Rice	extracellular	20.48	15.75
Bra014505.1-P	Field mustard	cytosol	27.06	8.94

Protein Annotations

Gene3D:1.25.40.180	MapMan:17.4.2.4.2	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra011218	EnsemblPlants:Bra011218.1	EnsemblPlants:Bra011218.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	InterPro:IPR003891
InterPro:IPR016021	InterPro:Initiation_fac_eIF4g_MI	UniProt:M4D414	InterPro:MIF4-like_sf	InterPro:MIF4G-like_typ-3	PFAM:PF02847
PFAM:PF02854	PFscan:PS51366	PANTHER:PTHR23253	PANTHER:PTHR23253:SF32	SMART:SM00543	SMART:SM00544
SUPFAM:SSF48371	UniParc:UPI0002546D87	SEG:seg	:	:	:

Description

AT2G24050 (E=8e-107) | MIF4G domain-containing protein / MA3 domain-containing protein

Coordinates

chrA01:+:3260760..3263480

Molecular Weight (calculated)

60253.0 Da

IEP (calculated)

5.110

GRAVY (calculated)

-0.165

Length

547 amino acids

Sequence
(BLAST)

001: MLSLRPGGGR GGSIFAPRSA LSSSSSSDLT NAEDAPSFAV KVVHSFALLL ELLARGDSRF EGHEIVRFTR EQLLQLKEGS QVSDEVLKLG KDIASDLFGE
101: EQSWGRSENK MTPEKYDLLK GQLIDSGITS ADILKGVIQL IFEKAVLEPT FCQMYALLCF DINGKLPSFP SEEAGGKEIT FKRVLLNNCQ EQFEGADKLK
201: EEVRLMTDPS QEMERKDKER MAKLRTLGNI RLIGELLKQK MVPEKIVHHI VQELLGSDDK DCPAEEDVEA LCQVFITIGK QLDESLRSRS INDMYFTRLK
301: ELAVHPMLEP RLRFMVRNVV DLRADKWIPR REEGSGGILN GKPSALLQGN SAEPAKAVVA PAKPAVEKPQ PQVAAPPMAA TSLNSEVLSR KTKSLLEEYF
401: NVRLLDEALQ CVEELKSPSY HPELVKEAIS LGLEKNPPCV TPVANLLAHL VSKNVLTPKD IGSGCLLYGS MLDDIGIDLP KAPNNFGEIL GSLVMASASG
501: FEVVKEILMK MEDEWFKKAV LDAVIKSVSD SLLVTHAADV EACRSLV

Best Arabidopsis Sequence Match ( AT2G24050.1 )
(BLAST)

001: MQQQGEPSVL SLRPGGGGGK SRLFVPRFSS SSSFDLTNGG SEETPFPVKR ENSGERVRFS REEILQHRES VQVSDEILRR CKEIAVELFG EEQSWGNHAA
101: ESKITNHTQH RHTETDNRDW HSRSQIPTSG KEWLRDDPRE AKSTWQGSGP TPVLIKAEVP WSAKRGALSD KDRVVKSVKG ILNKLTPEKY ELLKGQLIDA
201: GITSADILKE VIQLIFENAI LQPTFCEMYA LLCFDINGQL PSFPSEEPGG KEITFKRVLL NNCQEAFEGA GKLKEEIRQM TNPDQEMERM DKEKMAKLRT
301: LGNIRLIGEL LKQKMVPEKI VHHIVQELLG DDTKACPAEG DVEALCQFFI TIGKQLDDSP RSRGINDTYF GRLKELARHP QLELRLRFMV QNVVDLRANK
401: WVPRREEVKA KKINEIHSEA ERNLGMRPGA MASMRNNNNN RAAVSGAADG MGLGNILGRP GTGGMMPGMP GTRVMPMDED GWEMARTRSM PRGNRQTVQQ
501: PRFQPPPAIN KSLSVNSRLL PQGSGGLLNG GGRPSPLLQG NGSSSAPQAS KPIPTVEKPQ PRSQPQPQPQ AAPLANSLNA GELERKTKSL LEEYFSIRLV
601: DEALQCVEEL KSPSYHPELV KETISLGLEK NPPLVEPIAK LLKHLISKNV LTSKDLGAGC LLYGSMLDDI GIDLPKAPNS FGEFLGELVS AKVLDFELVR
701: DVLKKMEDEW FRKTVLNAVI KSVRECPSGQ SVLDSQAVEV EACQSLL

Arabidopsis Description

EIF(ISO)4G2Eukaryotic translation initiation factor isoform 4G-2 [Source:UniProtKB/Swiss-Prot;Acc:O82233]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.