Factsheet for Bra011211.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 2
mitochondrion 3
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011218.1-P	Field mustard	plastid	72.5	99.27
CDY69274	Canola	cytosol, mitochondrion	40.59	92.97
CDY28203	Canola	cytosol	61.28	89.82
CDY28211	Canola	mitochondrion	52.47	83.26
Bra024051.1-P	Field mustard	cytosol	82.51	82.62
AT4G30680.1	Thale cress	mitochondrion, plastid	22.7	64.64
GSMUA_Achr4P06000_001	Banana	cytosol	3.47	63.41
GSMUA_Achr4P05990_001	Banana	cytosol	11.48	58.5
KRH55033	Soybean	endoplasmic reticulum	59.55	57.55
VIT_11s0037g00490.t01	Wine grape	plastid	60.88	57.43
Solyc07g005810.2.1	Tomato	plastid	58.88	57.05
Bra020407.1-P	Field mustard	plastid	58.61	57.01
KRH63081	Soybean	endoplasmic reticulum	58.88	56.98
KRH03030	Soybean	endoplasmic reticulum	59.95	56.91
KRH72326	Soybean	endoplasmic reticulum	59.15	56.51
PGSC0003DMT400029102	Potato	cytosol, plastid	58.48	56.15
PGSC0003DMT400020464	Potato	cytosol	57.94	56.14
Solyc12g009960.1.1	Tomato	nucleus	57.01	55.24
GSMUA_Achr9P22750_001	Banana	plastid	53.0	53.36
Zm00001d025777_P007	Maize	plastid	55.41	52.87
HORVU2Hr1G086240.1	Barley	cytosol	52.74	52.46
EES12452	Sorghum	cytosol	54.87	51.96
Zm00001d003147_P001	Maize	plastid	54.47	51.91
GSMUA_AchrUn_...	Banana	cytosol	51.4	51.61
TraesCS2B01G373600.1	Wheat	cytosol	54.07	51.33
TraesCS2D01G353600.1	Wheat	cytosol, golgi, nucleus	53.94	51.27
TraesCS2A01G354900.1	Wheat	cytosol	53.94	51.14
Os02t0611500-01	Rice	cytosol	52.87	50.77
VIT_04s0008g06770.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, nucleus	58.88	49.94
Os04t0499300-01	Rice	plastid	53.0	49.26
GSMUA_Achr3P28040_001	Banana	cytosol	27.24	45.23
GSMUA_Achr4P05970_001	Banana	cytosol	8.41	41.72
Solyc07g005780.1.1	Tomato	cytosol	24.83	41.33
HORVU6Hr1G023180.1	Barley	cytosol	14.55	36.95
GSMUA_Achr4P12750_001	Banana	cytosol	54.47	35.17
Os06t0520600-01	Rice	extracellular	19.49	20.53
Bra014505.1-P	Field mustard	cytosol	24.43	11.05

Protein Annotations

Gene3D:1.25.40.180	MapMan:17.4.2.4.2	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra011211	EnsemblPlants:Bra011211.1	EnsemblPlants:Bra011211.1-P
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	InterPro:IPR003891
InterPro:IPR016021	InterPro:Initiation_fac_eIF4g_MI	UniProt:M4D407	InterPro:MIF4-like_sf	InterPro:MIF4G-like_typ-3	PFAM:PF02847
PFAM:PF02854	PFscan:PS51366	PANTHER:PTHR23253	PANTHER:PTHR23253:SF32	SMART:SM00543	SMART:SM00544
SUPFAM:SSF48371	UniParc:UPI0002546D8E	SEG:seg	:	:	:

Description

AT2G24050 (E=1e-251) | MIF4G domain-containing protein / MA3 domain-containing protein

Coordinates

chrA01:+:3302773..3305983

Molecular Weight (calculated)

82119.9 Da

IEP (calculated)

7.038

GRAVY (calculated)

-0.382

Length

749 amino acids

Sequence
(BLAST)

001: MLSLRPGGGR GGSIFAPRSA LSSSSSSDLT NAEDAPSFAV KVVHSFALLL ELLARGDSRF EGHEIVRFTR EQLLQLKEGS QVSDEVLKLG KDIASDLFGE
101: EQSWGRSENK PAAQVQNRYS ETDNRDWHTR APIPSPSKDR SREDQRESRD AYSGSIQGSG PPPALVKAEV PWSAKRGTLS EKDQVLKTVK GILNKMTPEK
201: YDLLKGQLID SGITSADILK GVIQLIFEKA VLEPTFCQMY ALLCFDINGK LPSFPSEEAG GKEITFKRVL LNNCQEQFEG ADKLKEEVRL MTDPSQEMER
301: KDKERMAKLR TLGNIRLIGE LLKQKMVPEK IVHHIVQELL GSDDKDCPAE EDVEALCQVF ITIGKQLDES LRSRSINDMY FTRLKELAVH PMLEPRLRFM
401: VRNVVDLRAD KWIPRREEMK AKKITEIHSE AEKTLGLRPG AMANMRNNNN RGGADADILG SGNFLGRSGT GGMMPGMPGA RKMPGMPVTD DDGWEMARSR
501: SMPRGNRQNP QPAGRVQSPA IINKSLSVNS RLLPQGSGGI LNGKPSALLQ GNSGEPAKAV IAPSKPAVEK PQPQVAAPPM AATSLNSEVL SRKTKSLLEE
601: YFNVRLLDEA LQCVEELKSP SYHPELVKEA ISLGLEKNPP CVTPVANLLA HLVSKNVLTP KDIGSGCLLY GSMLDDIGID LPKAPNNFGE ILGSLVMASA
701: SGFEVVKEIL MKMEDEWFKK AVLDAVIKSV SDSLLATHAA DVEACRSLV

Best Arabidopsis Sequence Match ( AT2G24050.1 )
(BLAST)

001: MQQQGEPSVL SLRPGGGGGK SRLFVPRFSS SSSFDLTNGG SEETPFPVKR ENSGERVRFS REEILQHRES VQVSDEILRR CKEIAVELFG EEQSWGNHAA
101: ESKITNHTQH RHTETDNRDW HSRSQIPTSG KEWLRDDPRE AKSTWQGSGP TPVLIKAEVP WSAKRGALSD KDRVVKSVKG ILNKLTPEKY ELLKGQLIDA
201: GITSADILKE VIQLIFENAI LQPTFCEMYA LLCFDINGQL PSFPSEEPGG KEITFKRVLL NNCQEAFEGA GKLKEEIRQM TNPDQEMERM DKEKMAKLRT
301: LGNIRLIGEL LKQKMVPEKI VHHIVQELLG DDTKACPAEG DVEALCQFFI TIGKQLDDSP RSRGINDTYF GRLKELARHP QLELRLRFMV QNVVDLRANK
401: WVPRREEVKA KKINEIHSEA ERNLGMRPGA MASMRNNNNN RAAVSGAADG MGLGNILGRP GTGGMMPGMP GTRVMPMDED GWEMARTRSM PRGNRQTVQQ
501: PRFQPPPAIN KSLSVNSRLL PQGSGGLLNG GGRPSPLLQG NGSSSAPQAS KPIPTVEKPQ PRSQPQPQPQ AAPLANSLNA GELERKTKSL LEEYFSIRLV
601: DEALQCVEEL KSPSYHPELV KETISLGLEK NPPLVEPIAK LLKHLISKNV LTSKDLGAGC LLYGSMLDDI GIDLPKAPNS FGEFLGELVS AKVLDFELVR
701: DVLKKMEDEW FRKTVLNAVI KSVRECPSGQ SVLDSQAVEV EACQSLL

Arabidopsis Description

EIF(ISO)4G2Eukaryotic translation initiation factor isoform 4G-2 [Source:UniProtKB/Swiss-Prot;Acc:O82233]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.