Factsheet for GSMUA_Achr11P23120_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P06000_001	Banana	cytosol	4.53	36.59
GSMUA_Achr4P05990_001	Banana	cytosol	12.69	28.57
GSMUA_Achr2P18290_001	Banana	cytosol	55.89	28.12
CDX89056	Canola	cytosol	42.9	24.19
GSMUA_Achr3P28040_001	Banana	cytosol	30.82	22.62
CDX98293	Canola	cytosol	46.22	21.43
PGSC0003DMT400004663	Potato	nucleus	52.27	20.89
GSMUA_AchrUn_...	Banana	cytosol	36.25	16.09
GSMUA_Achr9P22750_001	Banana	plastid	35.35	15.73
GSMUA_Achr11P...	Banana	nucleus	59.21	12.2
GSMUA_Achr11P...	Banana	nucleus	57.4	11.47
KRH66436	Soybean	endoplasmic reticulum	57.7	11.45
KRH48862	Soybean	nucleus	57.7	11.41
VIT_15s0021g00980.t01	Wine grape	nucleus	55.89	10.81
CDY42674	Canola	plastid	51.36	10.71
Solyc08g077700.2.1	Tomato	nucleus	52.27	10.5
Bra014505.1-P	Field mustard	cytosol	51.96	10.39
AT3G60240.4	Thale cress	cytosol	53.78	10.31
HORVU2Hr1G041760.1	Barley	nucleus	56.8	10.3
GSMUA_Achr4P12750_001	Banana	cytosol	35.95	10.26
GSMUA_Achr8P14940_001	Banana	plastid	59.82	10.19
KRH75579	Soybean	endoplasmic reticulum	55.59	10.1
TraesCS2D01G215300.1	Wheat	nucleus	57.1	10.09
Solyc01g088700.2.1	Tomato	nucleus	54.98	10.08
TraesCS2B01G235100.1	Wheat	golgi	57.1	10.08
TraesCS2A01G209100.1	Wheat	nucleus	57.1	10.07
KRH46542	Soybean	nucleus	55.89	10.07
HORVU2Hr1G041770.2	Barley	nucleus	56.8	10.05
PGSC0003DMT400004341	Potato	nucleus	54.38	9.96
KXG36457	Sorghum	cytosol	54.98	9.94
TraesCS2A01G390600.1	Wheat	nucleus, plastid	53.47	9.93
TraesCS2B01G408800.1	Wheat	nucleus	53.47	9.92
TraesCS2D01G388100.1	Wheat	nucleus	53.17	9.88
HORVU2Hr1G092940.7	Barley	nucleus	53.17	9.87
Zm00001d006573_P002	Maize	cytosol	54.38	9.81
KXG26815	Sorghum	nucleus	54.38	9.75
Zm00001d025979_P007	Maize	nucleus	53.47	9.73
Zm00001d021741_P001	Maize	nucleus	53.47	9.72
Os07t0555200-01	Rice	nucleus, plastid	18.43	4.71
GSMUA_Achr4P05970_001	Banana	cytosol	2.11	4.64
GSMUA_Achr2P18280_001	Banana	nucleus	11.18	3.61

Protein Annotations

EnsemblPlants:GSMUA_Achr11P23120_001	EnsemblPlants:GSMUA_Achr11T23120_001	EnsemblPlantsGene:GSMUA_Achr11G23120_001	Gene3D:1.25.40.180	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0005488	GO:GO:0005515	InterPro:ARM-type_fold	InterPro:IPR016021	InterPro:MIF4-like_sf
InterPro:MIF4G-like_typ-3	ncoils:Coil	PANTHER:PTHR23253	PANTHER:PTHR23253:SF35	PFAM:PF02854	SEG:seg
SMART:SM00543	SUPFAM:SSF48371	UniParc:UPI000295768C	UniProt:M0RUP2	MapMan:17.4.2.3.2	:

Description

Eukaryotic translation initiation factor 4G [Source:GMGC_GENE;Acc:GSMUA_Achr11G23120_001]

Coordinates

chr11:-:23145855..23147693

Molecular Weight (calculated)

37753.3 Da

IEP (calculated)

6.418

GRAVY (calculated)

-0.727

Length

331 amino acids

Sequence
(BLAST)

001: MDDEKCMAQG SPDADWSGRE TGSQQGLLPS PSPSPQTPWQ VMHKAENKYE VGKIADKEEA IQRRVRSILN KLTPQNFRRL FAQIRGVNID NALTLTGAVS
101: QIFNKALMEP TFSLCEMYAG LCSRLAGVLP DFNEMDERIT FKRLLMNKCQ EEFERREREE AEGHKVEMQH SEAEKEERRL LARMRGLGNV RLLGELYKQR
201: MLTERIMHEC IKKFLGQHQN PAEEDVEALC GLLGVIGKTI DHPKAKEHMD AYFDTMAKLS TDQKLSSRTR FMLRDVIDLR KNKWEARRKE EEPKKIDVGS
301: TGSGVPTMEA DAVPDSALPD MAQQESKAQD I

Best Arabidopsis Sequence Match ( AT3G60240.4 )
(BLAST)

0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQVTGEPGV GGPTNPTESF NRNTGPIPKA PTSQSTVMSS KINETPNTAK VAASGDASQA FPLQFGSLGP DLMVPARTTS APPNMDDQKR AQMQQSSLRT
0201: ASNVPASVPK KDSSNKGADN QLMRKEGHNP SSEKADIQVP HIAPPSQTQK SPITNIRMPS VQTPYQHTQV PHPVHFGGPN MHMQTPVTAT SFQMPMPMAL
0301: SMGNTPQIPP QVFYQGHPPH PMHHQGMMHQ AQGHGFATPM GAQIHPQLGH VGVGLSPQYP QQQGGKYGGA RKTTPVKITH PDTHEELRLD RRGDPYSEGD
0401: STALKPHSNP PPRSQPVSSF APRPVNLVQP SYNSNTMIYP PVSVPLNNGP MSSAQAPRYH YPVIDGSQRV QLINQPAHTA PQLIRPAAPA HLSSDSTSSV
0501: KARNAQNVMS SALPVNAKVS VKPAGVSEKL GSPKDRSHGE VNISLSQKNV EACSLSSSQQ PKPSFVSGVP NSSAPPAKSP VETVPLAKSS VETVPPVKSS
0601: VETAPVTTTE IRRAEMVSES ISVEDQTCKV EPPHNLTENR GQTMPDSLVS DPETATVAAK ENLSLPATNG FRKQLLKVST TSDAPTSDSV DTSIDKSTEG
0701: SSHASSEISG SSPQEKDLKC DNRTASDKLD ERSVISDAKH ETLSGVLEKA QNEVDGATDV CPVSEKLAVT DDTSSDLPHS THVLSSTVPL GHSETHKSAV
0801: ETNTRRNTST KGKKKIKEIL QKADAAGTTS DLYMAYKGPE EKKESSNVVH DVSNQNLLPA IPQAVEAIVD TEPVKNEPED WEDAADVSTP KLETADNSVN
0901: AKRGSSDEVS DNCINTEKKY SRDFLLKFAD LCTALPEGFD VSPDIANALI VAYMGASHHE HDSYPTPGKV MDRQASGARL DRRPSNVAGD DRWTKNQGSL
1001: PAGYGGNVGF RPGQGGNSGV LRNPRMQGPI ISRPMQPVGP MGGMGRNTPD LERWQRGSNF QQKGLFPSPH TPMQVMHKAE RKYQVGTIAD EEQAKQRQLK
1101: SILNKLTPQN FEKLFEQVKS VNIDNAVTLS GVISQIFDKA LMEPTFCEMY ADFCFHLSGA LPDFNENGEK ITFKRLLLNK CQEEFERGEK EEEEASRVAE
1201: EGQVEQTEEE REEKRLQVRR RMLGNIRLIG ELYKKRMLTE KIMHACIQKL LGYNQDPHEE NIEALCKLMS TIGVMIDHNK AKFQMDGYFE KMKMLSCKQE
1301: LSSRVRFMLI NAIDLRKNKW QERMKVEGPK KIEEVHRDAA QERQTQANRL SRGPSMNSSG RRGHMEFSSP RGGGGMLSPP AAQMGSYHGP PQGRGFSNQD
1401: IRFDDRPSYE PRMVPMPQRS VCEEPITLGP QGGLGQGMSI RRPAVASNTY QSDATQAGGG DSRRPAGGLN GFGSHRPASP VTHGRSSPQE RGTAYVHREF
1501: ASLSRASDLS PEVSSARQVL QGPSATVNSP RENALSEEQL ENLSLSAIKE YYSARDENEI GMCMKDMNSP AYHPTMISLW VTDSFERKDK ERDLLAKLLV
1601: NLVKSADNAL NEVQLVKGFE SVLKTLEDAV NDAPKAAEFL GRIFGKSVTE KVVTLTEIGR LIQEGGEEPG SLIEFGLGGD VLGSVLEMIK TEAGEETLVE
1701: IRRSSGLRIE NFKPHAPNRS KILEKFT

Arabidopsis Description

EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.