Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89056 | Canola | cytosol | 34.82 | 94.21 |
| AT3G60240.4 | Thale cress | cytosol | 78.09 | 71.8 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 22.98 | 55.47 |
| GSMUA_Achr11P... | Banana | cytosol | 10.71 | 51.36 |
| KRH66436 | Soybean | endoplasmic reticulum | 46.41 | 44.18 |
| KRH48862 | Soybean | nucleus | 46.16 | 43.79 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 46.91 | 43.52 |
| PGSC0003DMT400004663 | Potato | nucleus | 22.48 | 43.12 |
| KRH46542 | Soybean | nucleus | 46.35 | 40.07 |
| KRH75579 | Soybean | endoplasmic reticulum | 45.91 | 40.01 |
| GSMUA_Achr11P... | Banana | nucleus | 40.11 | 38.47 |
| GSMUA_Achr11P... | Banana | nucleus | 38.41 | 37.96 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 41.5 | 33.9 |
| TraesCS2A01G209100.1 | Wheat | nucleus | 38.54 | 32.62 |
| TraesCS2D01G215300.1 | Wheat | nucleus | 38.41 | 32.57 |
| CDX98293 | Canola | cytosol | 14.61 | 32.49 |
| TraesCS2B01G235100.1 | Wheat | golgi | 38.16 | 32.32 |
| HORVU2Hr1G041760.1 | Barley | nucleus | 37.03 | 32.22 |
| HORVU2Hr1G041770.2 | Barley | nucleus | 36.96 | 31.39 |
| Solyc08g077700.2.1 | Tomato | nucleus | 31.61 | 30.46 |
| KXG36457 | Sorghum | cytosol | 33.5 | 29.06 |
| TraesCS2D01G388100.1 | Wheat | nucleus | 32.3 | 28.8 |
| TraesCS2A01G390600.1 | Wheat | nucleus, plastid | 32.18 | 28.68 |
| HORVU2Hr1G092940.7 | Barley | nucleus | 32.18 | 28.66 |
| Zm00001d021741_P001 | Maize | nucleus | 32.81 | 28.61 |
| CDY28211 | Canola | mitochondrion | 8.5 | 28.6 |
| TraesCS2B01G408800.1 | Wheat | nucleus | 32.12 | 28.59 |
| Zm00001d006573_P002 | Maize | cytosol | 32.37 | 28.01 |
| KXG26815 | Sorghum | nucleus | 32.12 | 27.61 |
| CDY69274 | Canola | cytosol, mitochondrion | 5.67 | 27.52 |
| Zm00001d025979_P007 | Maize | nucleus | 30.98 | 27.03 |
| CDY28203 | Canola | cytosol | 8.5 | 26.42 |
| CDY39236 | Canola | cytosol | 11.4 | 24.49 |
| CDX68687 | Canola | plastid | 11.46 | 24.33 |
| CDX72262 | Canola | cytosol | 11.21 | 23.86 |
| CDY32742 | Canola | plastid | 11.4 | 23.51 |
| CDY02774 | Canola | plastid | 11.4 | 23.45 |
| Os07t0555200-01 | Rice | nucleus, plastid | 14.29 | 17.52 |
| CDX89055 | Canola | nucleus | 5.1 | 8.92 |
Protein Annotations
| Gene3D:1.25.40.180 | MapMan:17.4.2.3.2 | GO:A0A078HZ96 | UniProt:A0A078HZ96 | InterPro:ARM-type_fold | EnsemblPlants:CDY42674 |
| ProteinID:CDY42674 | ProteinID:CDY42674.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00075197001 | InterPro:IPR003891 | InterPro:IPR016021 | InterPro:Initiation_fac_eIF4g_MI |
| InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 | PFAM:PF02847 | PFAM:PF02854 | PFscan:PS51366 | PANTHER:PTHR23253 |
| PANTHER:PTHR23253:SF9 | SMART:SM00543 | SMART:SM00544 | SUPFAM:SSF48371 | UniParc:UPI0004EE1365 | SEG:seg |
Description
BnaC04g22320DBnaC04g22320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ96]
Coordinates
chrLK032531:+:188298..194475
Molecular Weight (calculated)
172926.0 Da
IEP (calculated)
7.722
GRAVY (calculated)
-0.757
Length
1588 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSYNQSRPTD NQQYRPTGRS AGYQQQQQQP HRSSAAGYGR GAGAGARPAP ASSATVDPSN RSFKKPQGGQ HQPRVNLPPV NHSVSNNHNG PNVQSRSQGA
0101: SGEPVANSTS GAIPKAPTSQ SPAVNSKINE AQNTVKVSGD PSKAFAFQFG SLGPDLMKIP ARTSSAPPNM DEQKRAQMQQ ASLKAAPNVP ASVPKNNSPN
0201: KAADNQVMRK EGRNPSSDKA DVQVHHMSPL SQTQKSPITH IRMPSVQTPY QQHPQVPHPV HFGAPPNMHM QPPNVAPTSF QMPMPMGLPM GNTPQIQQQV
0301: FFQGLPSHPM HHQGMMHQAQ GHGFAGPMGA QIHPQMGHVG VGMSPQYPQQ QGGKYGGGRK TTPVKITHPD THEELRLGGR GDPHQDGQPQ GPKSHPNTPP
0401: RSHPVSAFAP RPLNVIQTSF SSSPMMYPPV SVPFNSGPMS SAQAPRFQFS VSDGSQRVQF TKQSAPHVSS DSSSVKAHVT SSALPAPGRV TVKQAATSEE
0501: TNVALSQKKA ETGSLDSLQQ PKPGSVSALS NSSAPPAKAP VETVTVATNS VEDQTQTCKV EPSHNATEVH GQTQVSDLET KAIIAKENSP LPATNGVEKQ
0601: NVPASDSPDT KIDKTAEDLN CDERTISGKQ VEESLISDEK LESVSGVLEK AQNEVDGATD ISSDSEKVAA KVADDTTSEL PHSTHTQSST VPVGHSTSLS
0701: KDKPAFESNI RRTTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE IAMPSESSDF SNEKLAPAID VVEASVDAEP VKNEPENWED AADVSTPKLE
0801: SVQGNPGSAD EVRDSCSNTE KKYSRDFLLK FADMFTALPE GFDVSPDIAN SLIFANTGAP HHEHGKVMDR QGSSGRRPIN MVDDRWAKNQ GSLPSGHGGN
0901: SGFRTGQGGN SGVLRNPRMQ QGPIMSRPMQ PVGPMGRNDL DRWQRGSNFQ QKGLFPSPHT PMQVMHRAER KYQVGTVTDE EQAKQRQLKG ILNKLTPQNF
1001: EKLFEQVKGV NIDNVVTLNG VISQIFDKAL MEPTFCEMYA DFCVHLSGAL PELNEDGEKV TFKRLLLNKC QEEFERGEKE EEEASRVAEE GQVEQTEEER
1101: EEKRLKVRRR MLGNIRLIGE LYKKRMLTEK IMHACIQKLL GYEQDPHEEN IEALCKLMST IGVMIDHSKA KAYIDGYFDR MKMLSGKEEL SSRVRFMLIN
1201: AIDLRKNKWQ ERMKVEGPKK IEEVHRDAAQ ERQTQAKRLS RGPSMNVSGR RGHMEYSPRG GGGGMLSPPS AQMGGYHGPS QGRGYNNNNQ DIRFDERSAY
1301: EPRMVPMSQR SVGEEPITLG PQGGLGQGMS FRKPAVVSNT MQSDPRRPAG GLNGVGSQRP ASPFSRASDP SSEVSSARQV QQGPSSAVDS PRENLLSEER
1401: LQDMSLSAIK EYYSARDEKE IGLCMKDINS PAFHPTMISL WVTDSFERKD KERDLLAKLL VNLVKSADNV LTEAQLVKGF ETVLTTLEDA VNDAPKAAEF
1501: LGKIFGKSVT EKVVTLAEIG RLIREGGEEP GSLMEFGLGG DVLGSVLETI KSEAGEEAFV EIHRSSGLRI EDFKPPAPNR SKILDKFT
0101: SGEPVANSTS GAIPKAPTSQ SPAVNSKINE AQNTVKVSGD PSKAFAFQFG SLGPDLMKIP ARTSSAPPNM DEQKRAQMQQ ASLKAAPNVP ASVPKNNSPN
0201: KAADNQVMRK EGRNPSSDKA DVQVHHMSPL SQTQKSPITH IRMPSVQTPY QQHPQVPHPV HFGAPPNMHM QPPNVAPTSF QMPMPMGLPM GNTPQIQQQV
0301: FFQGLPSHPM HHQGMMHQAQ GHGFAGPMGA QIHPQMGHVG VGMSPQYPQQ QGGKYGGGRK TTPVKITHPD THEELRLGGR GDPHQDGQPQ GPKSHPNTPP
0401: RSHPVSAFAP RPLNVIQTSF SSSPMMYPPV SVPFNSGPMS SAQAPRFQFS VSDGSQRVQF TKQSAPHVSS DSSSVKAHVT SSALPAPGRV TVKQAATSEE
0501: TNVALSQKKA ETGSLDSLQQ PKPGSVSALS NSSAPPAKAP VETVTVATNS VEDQTQTCKV EPSHNATEVH GQTQVSDLET KAIIAKENSP LPATNGVEKQ
0601: NVPASDSPDT KIDKTAEDLN CDERTISGKQ VEESLISDEK LESVSGVLEK AQNEVDGATD ISSDSEKVAA KVADDTTSEL PHSTHTQSST VPVGHSTSLS
0701: KDKPAFESNI RRTTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE IAMPSESSDF SNEKLAPAID VVEASVDAEP VKNEPENWED AADVSTPKLE
0801: SVQGNPGSAD EVRDSCSNTE KKYSRDFLLK FADMFTALPE GFDVSPDIAN SLIFANTGAP HHEHGKVMDR QGSSGRRPIN MVDDRWAKNQ GSLPSGHGGN
0901: SGFRTGQGGN SGVLRNPRMQ QGPIMSRPMQ PVGPMGRNDL DRWQRGSNFQ QKGLFPSPHT PMQVMHRAER KYQVGTVTDE EQAKQRQLKG ILNKLTPQNF
1001: EKLFEQVKGV NIDNVVTLNG VISQIFDKAL MEPTFCEMYA DFCVHLSGAL PELNEDGEKV TFKRLLLNKC QEEFERGEKE EEEASRVAEE GQVEQTEEER
1101: EEKRLKVRRR MLGNIRLIGE LYKKRMLTEK IMHACIQKLL GYEQDPHEEN IEALCKLMST IGVMIDHSKA KAYIDGYFDR MKMLSGKEEL SSRVRFMLIN
1201: AIDLRKNKWQ ERMKVEGPKK IEEVHRDAAQ ERQTQAKRLS RGPSMNVSGR RGHMEYSPRG GGGGMLSPPS AQMGGYHGPS QGRGYNNNNQ DIRFDERSAY
1301: EPRMVPMSQR SVGEEPITLG PQGGLGQGMS FRKPAVVSNT MQSDPRRPAG GLNGVGSQRP ASPFSRASDP SSEVSSARQV QQGPSSAVDS PRENLLSEER
1401: LQDMSLSAIK EYYSARDEKE IGLCMKDINS PAFHPTMISL WVTDSFERKD KERDLLAKLL VNLVKSADNV LTEAQLVKGF ETVLTTLEDA VNDAPKAAEF
1501: LGKIFGKSVT EKVVTLAEIG RLIREGGEEP GSLMEFGLGG DVLGSVLETI KSEAGEEAFV EIHRSSGLRI EDFKPPAPNR SKILDKFT
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
Arabidopsis Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.