Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | cytosol | 4.71 | 18.43 |
| TraesCS2B01G235100.1 | Wheat | golgi | 26.23 | 18.13 |
| TraesCS2D01G215300.1 | Wheat | nucleus | 26.0 | 17.99 |
| TraesCS2A01G209100.1 | Wheat | nucleus | 25.93 | 17.91 |
| GSMUA_Achr11P... | Banana | nucleus | 22.15 | 17.33 |
| HORVU2Hr1G041760.1 | Barley | nucleus | 24.38 | 17.32 |
| HORVU2Hr1G041770.2 | Barley | nucleus | 23.69 | 16.42 |
| GSMUA_Achr8P14940_001 | Banana | plastid | 24.07 | 16.05 |
| GSMUA_Achr11P... | Banana | nucleus | 19.75 | 15.93 |
| KRH66436 | Soybean | endoplasmic reticulum | 20.06 | 15.59 |
| Zm00001d006573_P002 | Maize | cytosol | 21.68 | 15.31 |
| KXG36457 | Sorghum | cytosol | 21.37 | 15.13 |
| KRH48862 | Soybean | nucleus | 19.52 | 15.11 |
| Zm00001d021741_P001 | Maize | nucleus | 21.22 | 15.1 |
| KRH75579 | Soybean | endoplasmic reticulum | 20.29 | 14.43 |
| VIT_15s0021g00980.t01 | Wine grape | nucleus | 19.06 | 14.43 |
| KRH46542 | Soybean | nucleus | 20.29 | 14.32 |
| Bra014505.1-P | Field mustard | cytosol | 18.29 | 14.31 |
| CDY42674 | Canola | plastid | 17.52 | 14.29 |
| AT3G60240.4 | Thale cress | cytosol | 18.21 | 13.67 |
| PGSC0003DMT400004341 | Potato | nucleus | 18.83 | 13.5 |
| Solyc01g088700.2.1 | Tomato | nucleus | 17.9 | 12.85 |
| GSMUA_Achr2P18290_001 | Banana | cytosol | 6.1 | 12.01 |
| Solyc08g077700.2.1 | Tomato | nucleus | 14.2 | 11.16 |
| CDX98293 | Canola | cytosol | 6.1 | 11.06 |
| PGSC0003DMT400004663 | Potato | nucleus | 6.02 | 9.42 |
| CDX89056 | Canola | cytosol | 3.55 | 7.84 |
| Os06t0520600-01 | Rice | extracellular | 3.86 | 7.03 |
| Os02t0611500-01 | Rice | cytosol | 3.7 | 6.15 |
| Os04t0499300-01 | Rice | plastid | 3.78 | 6.08 |
| Os06t0519400-01 | Rice | nucleus | 0.85 | 3.94 |
Protein Annotations
| Gene3D:1.25.40.180 | MapMan:17.4.2.3.2 | UniProt:A0A0P0X7E2 | InterPro:ARM-type_fold | ProteinID:BAT02092.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006417 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR016021 | InterPro:MIF4-like_sf | InterPro:MIF4G-like_typ-3 |
| EnsemblPlantsGene:Os07g0555200 | EnsemblPlants:Os07t0555200-01 | PFAM:PF02854 | PANTHER:PTHR23253 | PANTHER:PTHR23253:SF9 | SUPFAM:SSF48371 |
| UniParc:UPI000393BECE | SEG:seg | : | : | : | : |
Description
Rice tungro spherical virus (RTSV) resistance gene, RTSV resistance gene, eukaryotic translation initiation factor 4GSimilar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-01);Similar to Eukaryotic translation initiation factor 4g (Fragment). (Os07t0555200-02);Similar to predicted protein. (Os07t0555200-03);Similar to predicted protein. (Os07t0555200-04);Similar to predicted protein. (Os07t0555200-05)
Coordinates
chr7:+:22114961..22120060
Molecular Weight (calculated)
138360.0 Da
IEP (calculated)
7.224
GRAVY (calculated)
-0.777
Length
1296 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSQRGDRGEG HARRPGRSSS FGGGHRGGGG VGGAGKGGGG SSGQPPLATN RSFRKSGNGH GGHQRAVSQP DTHGFQPAPA PTALQTPPLR PPAPQNAPAH
0101: VPVPAPRPQH HDPSGARAPT LPPSSENTAN APPLKGIPHA APRAPSRISS TSTSQGAPKG GAYNLQFGSF PMNGGTGGST MQFPARTSSA PPNLDEQKRM
0201: QALPEGHKVV PSGLVPQAPK HQQQQQPLQQ QKQQPQSQPP LQQTRKDVVS SNHSSKPINP HIPSQVKSSV HVSPSVPNVA PPRPPVQQIP GMPMSMPFHH
0301: QAPLQFGGHN PQIPPQGVVP SSLQMSMGLH GANAPQVAQQ MYIPTIQHHH QLQPPTMMHQ AAGIPYGPAA HQLTQMSGMM NVGVAPQFTP QQPNKYVTGP
0401: TRKTTVKITH PDTHEELKLD KRMDSSGQRG LPSVQQQSQP VSTYGSPMGF YQQNSYNQST MFYPTTSGVG QVPTVSQGPR FVSTQTVSYI SPSMNTGPGS
0501: NKDNLAGSTT SGHSQVTGKP HPAGLHMEKS GVQTVTISAP PGKSDVNKLK PAEDVVSHRQ KDNEAVSGVR KSGENESKAS PITEKHPTPV SQPLQALAAN
0601: PETTAAASFV VNSVPGDDGK SKESIQRTGS FKDSNKNATK DTRNLSQEPQ SASSAEDLKV HTSVKDVCCG VSLMESKGVN KESEQTNAAS ASPTEMLKAA
0701: DASSIDRSSA RSTSESTENV QEVGKSDVAI GDSEKSGITN KVSPDLTKDD ISSGSTGNES HEVCTLDLAE QLPVGASNPD NLDTATSVTD QGQLLKEPSS
0801: SVSDENVIMD RSHQSAEKMS DLVDDTVASV ASSETLPESI IQNANAKGNT SGNQETGSAT SSNILNVLPV PHSVASEDPL KPESMLKDQS SSAPAASARP
0901: VSREKPSVEI TRTKFTAVKK KKRREMLSKA DAAGSSDLYN AYKGPEEKVD FIGASESLDS SSIADHELPD ESSEKEVNMG EDEGKKKVEL DDWEDAAEMS
1001: TPKLERSDSS NQTTEANGRK RYSRDFLLTL AQSCTNLPVG FQMIEYASVL FPNLAGKSYV VDHPSPGRGA DRPASRGDRR GVVIEDDRWG KSGHLFGSGR
1101: DMSMDNGPPT MNHRGAPGVM RNPRGGLINV GPVAPQMSRS GSDADRWQQK GIFPSPVTPM QVMHKAEKKY VVGKVSDEEE AKQRQLKAIL NKLTPQNFEK
1201: LFEKVKEVNI DNVATLTGVI SQIFDKALME PTFCEMYANF CFHLAGALPD FSEDNEKITF KRLLLNKCQE EFERGEREEA EADKTEEEGE IKQTKE
0101: VPVPAPRPQH HDPSGARAPT LPPSSENTAN APPLKGIPHA APRAPSRISS TSTSQGAPKG GAYNLQFGSF PMNGGTGGST MQFPARTSSA PPNLDEQKRM
0201: QALPEGHKVV PSGLVPQAPK HQQQQQPLQQ QKQQPQSQPP LQQTRKDVVS SNHSSKPINP HIPSQVKSSV HVSPSVPNVA PPRPPVQQIP GMPMSMPFHH
0301: QAPLQFGGHN PQIPPQGVVP SSLQMSMGLH GANAPQVAQQ MYIPTIQHHH QLQPPTMMHQ AAGIPYGPAA HQLTQMSGMM NVGVAPQFTP QQPNKYVTGP
0401: TRKTTVKITH PDTHEELKLD KRMDSSGQRG LPSVQQQSQP VSTYGSPMGF YQQNSYNQST MFYPTTSGVG QVPTVSQGPR FVSTQTVSYI SPSMNTGPGS
0501: NKDNLAGSTT SGHSQVTGKP HPAGLHMEKS GVQTVTISAP PGKSDVNKLK PAEDVVSHRQ KDNEAVSGVR KSGENESKAS PITEKHPTPV SQPLQALAAN
0601: PETTAAASFV VNSVPGDDGK SKESIQRTGS FKDSNKNATK DTRNLSQEPQ SASSAEDLKV HTSVKDVCCG VSLMESKGVN KESEQTNAAS ASPTEMLKAA
0701: DASSIDRSSA RSTSESTENV QEVGKSDVAI GDSEKSGITN KVSPDLTKDD ISSGSTGNES HEVCTLDLAE QLPVGASNPD NLDTATSVTD QGQLLKEPSS
0801: SVSDENVIMD RSHQSAEKMS DLVDDTVASV ASSETLPESI IQNANAKGNT SGNQETGSAT SSNILNVLPV PHSVASEDPL KPESMLKDQS SSAPAASARP
0901: VSREKPSVEI TRTKFTAVKK KKRREMLSKA DAAGSSDLYN AYKGPEEKVD FIGASESLDS SSIADHELPD ESSEKEVNMG EDEGKKKVEL DDWEDAAEMS
1001: TPKLERSDSS NQTTEANGRK RYSRDFLLTL AQSCTNLPVG FQMIEYASVL FPNLAGKSYV VDHPSPGRGA DRPASRGDRR GVVIEDDRWG KSGHLFGSGR
1101: DMSMDNGPPT MNHRGAPGVM RNPRGGLINV GPVAPQMSRS GSDADRWQQK GIFPSPVTPM QVMHKAEKKY VVGKVSDEEE AKQRQLKAIL NKLTPQNFEK
1201: LFEKVKEVNI DNVATLTGVI SQIFDKALME PTFCEMYANF CFHLAGALPD FSEDNEKITF KRLLLNKCQE EFERGEREEA EADKTEEEGE IKQTKE
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
Arabidopsis Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.