Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69274 | Canola | cytosol, mitochondrion | 4.07 | 11.31 |
| CDY02774 | Canola | plastid | 8.81 | 10.36 |
| CDY32742 | Canola | plastid | 8.7 | 10.26 |
| CDY28211 | Canola | mitochondrion | 5.29 | 10.17 |
| CDX72262 | Canola | cytosol | 7.82 | 9.52 |
| CDY39236 | Canola | cytosol | 7.71 | 9.47 |
| CDX68687 | Canola | plastid | 7.71 | 9.36 |
| CDX89056 | Canola | cytosol | 5.95 | 9.2 |
| CDY28203 | Canola | cytosol | 5.07 | 9.0 |
| CDX98293 | Canola | cytosol | 5.84 | 7.42 |
| GSMUA_Achr2P18280_001 | Banana | nucleus | 7.82 | 6.93 |
| Os06t0519400-01 | Rice | nucleus | 2.09 | 6.81 |
| CDY42674 | Canola | plastid | 8.92 | 5.1 |
Protein Annotations
| EnsemblPlants:CDX89055 | EnsemblPlantsGene:GSBRNA2T00149180001 | PANTHER:PTHR23253 | PANTHER:PTHR23253:SF9 | ProteinID:CDX89055 | ProteinID:CDX89055.1 |
| SEG:seg | UniParc:UPI0004EDE8E2 | MapMan:35.1 | : | : | : |
Description
BnaA04g01310D
Coordinates
chrLK031857:+:824066..827710
Molecular Weight (calculated)
96798.3 Da
IEP (calculated)
8.005
GRAVY (calculated)
-0.842
Length
908 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYNQPRPSD NQQYRRTGRS AGYQQQQQQQ QPHRSSAAGY GRGAGAGAGP APASSATVDP SNRSFKKAQG GGQQHQPRVN LPPVNHHSNN HNGPPNVQSR
101: SQGASGEPVI GGPGNSISGA IPKAPTSQSP AVNSKSNEAQ NTAKLSGDPS KAFAFQFGSL GPDLMKIPAR TSSAPPNMDE QKRAQMQQAS LKAAPNVPVS
201: VPKNNSPNKA ADNQVMRKEG RNPSSDKADV QVHHMSPLSQ TQKSPITHIR MPSVQTPYQQ HPQVPHPVHF GAPPNMHMQP PNVAPTSFQM PMPMGLPMGN
301: TPQIQQQVFF QGLPSHPMHH QGMMHQAQGH GFAAPMGAQI HPQMGHVGVG MSPQYPQQQG GKYGGGRKTT PVKITHPDTH EELRLGGRGD PHQDVQPQAS
401: VPFNSGPMSS AQAPRFQFPV VDGSQRVQFT NQSAHTAPHV SSDSSSVKAH VTSSAFPAPG RVTVKQAATS EKLESPKARS HEETNVALSQ KKAETGLLDS
501: LQQPKPGSVS ALSNSSAPPA KAPVETVTVA TTTIGSVQIV NESSSVEDQT QTCKVEPSHN ATEVHGQTPV SDLETKAIAA KENSRLPATN GLEKQNVPAS
601: DAPDTKIDKT AEDLNCDERT ISGKQVEESV ISDEKLETVS GVLEKAHNEV DGATDISSDS EKVAKVADDT SSELPHSTHT QSSTVPVGHS TSLSKDKPAF
701: ESNIRRTTST KGRKKIKEIL QKADAAGTTA DLYMAYKGPE EKKEIAMPSE SSDVSNEKLA PAIPQDVVEA TMDAEPVKNE PENWEDAADV STPKLESVQG
801: KPGSADEVRD GCSNTEKKYS RDFLLKFADM FTALPEGFDV SPDIANALIF VNTGAPHHEH GKVMDRQGSS GRRPSNMVDD RWAKNQGSLP SGHGGNADGR
901: NGQKQRLR
101: SQGASGEPVI GGPGNSISGA IPKAPTSQSP AVNSKSNEAQ NTAKLSGDPS KAFAFQFGSL GPDLMKIPAR TSSAPPNMDE QKRAQMQQAS LKAAPNVPVS
201: VPKNNSPNKA ADNQVMRKEG RNPSSDKADV QVHHMSPLSQ TQKSPITHIR MPSVQTPYQQ HPQVPHPVHF GAPPNMHMQP PNVAPTSFQM PMPMGLPMGN
301: TPQIQQQVFF QGLPSHPMHH QGMMHQAQGH GFAAPMGAQI HPQMGHVGVG MSPQYPQQQG GKYGGGRKTT PVKITHPDTH EELRLGGRGD PHQDVQPQAS
401: VPFNSGPMSS AQAPRFQFPV VDGSQRVQFT NQSAHTAPHV SSDSSSVKAH VTSSAFPAPG RVTVKQAATS EKLESPKARS HEETNVALSQ KKAETGLLDS
501: LQQPKPGSVS ALSNSSAPPA KAPVETVTVA TTTIGSVQIV NESSSVEDQT QTCKVEPSHN ATEVHGQTPV SDLETKAIAA KENSRLPATN GLEKQNVPAS
601: DAPDTKIDKT AEDLNCDERT ISGKQVEESV ISDEKLETVS GVLEKAHNEV DGATDISSDS EKVAKVADDT SSELPHSTHT QSSTVPVGHS TSLSKDKPAF
701: ESNIRRTTST KGRKKIKEIL QKADAAGTTA DLYMAYKGPE EKKEIAMPSE SSDVSNEKLA PAIPQDVVEA TMDAEPVKNE PENWEDAADV STPKLESVQG
801: KPGSADEVRD GCSNTEKKYS RDFLLKFADM FTALPEGFDV SPDIANALIF VNTGAPHHEH GKVMDRQGSS GRRPSNMVDD RWAKNQGSLP SGHGGNADGR
901: NGQKQRLR
0001: MSYNQSRPDR SETQYRRTGR STGNQQQQQQ HRSSSAAGYG KGAGAPGSAP APSTYPDNSS LSSNRSFKKP GNAQGGGQPR VNLPPVNHPN NHNNGPNAHS
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
0101: RSQGEPGVGG PTNPTESFNR NTGPIPKAPT SQSTVMSSKI NETPNTAKAS GDASQAFPLQ FGSLGPDLMV PARTTSAPPN MDDQKRAQMQ QSSLRTASNV
0201: PASVPKKDSS NKGADNQLMR KEGHNPSSEK ADIQVPHIAP PSQTQKSPIT NIRMPSVQTP YQHTQVPHPV HFGGPNMHMQ TPVTATSFQM PMPMALSMGN
0301: TPQIPPQVFY QGHPPHPMHH QGMMHQAQGH GFATPMGAQI HPQLGHVGVG LSPQYPQQQG GKYGGARKTT PVKITHPDTH EELRLDRRGD PYSEGDSTAL
0401: KPHSNPPPRS QPVSSFAPRP VNLVQPSYNS NTMIYPPVSV PLNNGPMSSA QAPRYHYPVI DGSQRVQLIN QPAHTAPQLI RPAAPAHLSS DSTSSVKARN
0501: AQNVMSSALP VNAKVSVKPA GVSEKLGSPK DRSHGEVNIS LSQKNVEACS LSSSQQPKPS FVSGVPNSSA PPAKSPVETV PLAKSSVETV PPVKSSVETA
0601: PVTTTEIRRA EMVSESISVE DQTCKVEPPH NLTENRGQTM PDSLVSDPET ATVAAKENLS LPATNGFRKQ LLKVSTTSDA PTSDSVDTSI DKSTEGSSHA
0701: SSEISGSSPQ EKDLKCDNRT ASDKLDERSV ISDAKHETLS GVLEKAQNEV DGATDVCPVS EKLAVTDDTS SDLPHSTHVL SSTVPLGHSE THKSAVETNT
0801: RRNTSTKGKK KIKEILQKAD AAGTTSDLYM AYKGPEEKKE SSNVVHDVSN QNLLPAIPQA VEAIVDTEPV KNEPEDWEDA ADVSTPKLET ADNSVNAKRG
0901: SSDEVSDNCI NTEKKYSRDF LLKFADLCTA LPEGFDVSPD IANALIVAYM GASHHEHDSY PTPGKVMDRQ ASGARLDRRP SNVAGDDRWT KNQGSLPAGY
1001: GGNVGFRPGQ GGNSGVLRNP RMQGPIISRP MQPVGPMGGM GRNTPDLERW QRGSNFQQKG LFPSPHTPMQ VMHKAERKYQ VGTIADEEQA KQRQLKSILN
1101: KLTPQNFEKL FEQVKSVNID NAVTLSGVIS QIFDKALMEP TFCEMYADFC FHLSGALPDF NENGEKITFK RLLLNKCQEE FERGEKEEEE ASRVAEEGQV
1201: EQTEEEREEK RLQVRRRMLG NIRLIGELYK KRMLTEKIMH ACIQKLLGYN QDPHEENIEA LCKLMSTIGV MIDHNKAKFQ MDGYFEKMKM LSCKQELSSR
1301: VRFMLINAID LRKNKWQERM KVEGPKKIEE VHRDAAQERQ TQANRLSRGP SMNSSGRRGH MEFSSPRGGG GMLSPPAAQM GSYHGPPQGR GFSNQDIRFD
1401: DRPSYEPRMV PMPQRSVCEE PITLGPQGGL GQGMSIRRPA VASNTYQSDA TQAGGGDSRR PAGGLNGFGS HRPASPVTHG RSSPQERGTA YVHREFASLS
1501: RASDLSPEVS SARQVLQGPS ATVNSPRENA LSEEQLENLS LSAIKEYYSA RDENEIGMCM KDMNSPAYHP TMISLWVTDS FERKDKERDL LAKLLVNLVK
1601: SADNALNEVQ LVKGFESVLK TLEDAVNDAP KAAEFLGRIF GKSVTEKVVT LTEIGRLIQE GGEEPGSLIE FGLGGDVLGS VLEMIKTEAG EETLVEIRRS
1701: SGLRIENFKP HAPNRSKILE KFT
Arabidopsis Description
EIF4GEukaryotic translation initiation factor 4G [Source:UniProtKB/Swiss-Prot;Acc:Q76E23]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.